General info Cross-references Sequences Orthologs Ortholog sequences Validation experiments Sites Predictions Palmitoyl-proteomes References
Palmitoyl-proteomes
0/22
article for human
10 orthologs
10 orthologs
Validation experiments
1
experiment
1 ortholog
1 ortholog
Curated sites & Enzymes
0
site from validation experiments*
0 site from palmitoyl-proteomes*
No PAT known
No APT known
*In main isoform only
0 site from palmitoyl-proteomes*
No PAT known
No APT known
*In main isoform only
Predictions
Predicted
2
cysteines in main isoform
Protein names
Tyrosine-protein kinase HCK, EC 2.7.10.2; Hematopoietic cell kinase; Hemopoietic cell kinase; p59-HCK/p60-HCK; p59Hck; p61Hck
Subcellular location
Lysosome; Membrane (Probable); Cell projection; podosome membrane; Cytoplasm (Probable); cytosol; Cell membrane (By similarity); caveola (Probable); Cell junction (Probable); focal adhesion; cytoskeleton; Golgi apparatus; Cytoplasmic vesicle; Nucleus (Probable); secretory vesicle; Podosome membrane; Cytosol (Probable); Caveola (Probable); Focal adhesion (Probable); Cytoskeleton (Probable); Secretory vesicle (Probable)
Isoforms & protein length
Isoform 1 (main): 526 aa; Isoform 2 : 505 aa; Isoform 3 : 504 aa; Isoform 4 : 525 aa
Known functions
Source | Identifiers |
---|---|
UniProt gene names | HCK |
UniProt secondary AC | A8K1I1, B4DQB6, E1P5M2, Q29RX1, Q2VPE2, Q504R5, Q5T7K1, Q5T7K2, Q96CC0, Q9H5Y5, Q9NUA4, Q9UMJ5 |
Refseq protein ID | NP_001165600.1, NP_001165601.1, NP_001165602.1, NP_001165604.1, NP_002101.2 |
IPI ID | IPI00029769, IPI00646510, IPI00099527, IPI00060390, IPI00041510 |
Source | Identifiers |
---|---|
Ensembl protein | ENSP00000486627, ENSP00000427757, ENSP00000429848, ENSP00000441169 |
Ensembl gene | ENSG00000101336 |
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UniProt feature viewer
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UniProt AC | st. | UniProt ID | Orthology source | Organism | Gene names | Protein name | Palmitome articles | Times validated | Techniques | Sites | Predicted |
---|---|---|---|---|---|---|---|---|---|---|---|
P25911 | LYN_MOUSE | OrthoDB | M. musculus | Lyn | Tyrosine-protein kinase Lyn, EC 2.7.10.2 | 10/23 | 0 | 3 | 2 | Yes | |
P08103 | HCK_MOUSE | Ensembl, InParanoid, MetaPhors | M. musculus | Hck | Tyrosine-protein kinase HCK, EC 2.7.10.2 | 3/23 | 1 | 2 | 0 | Yes | |
P50527 | STE20_SCHPO | MetaPhors | S. pombe | shk1, orb2, pak1, ste20, SPBC1604.14c | Serine/threonine-protein kinase shk1/pak1 | 0/1 | 0 | 0 | 0 | No | |
P36582 | PCK1_SCHPO | MetaPhors | S. pombe | pck1, SPAC17G8.14c, SPAC22H10.01c | Protein kinase C-like 1 | 0/1 | 0 | 0 | 0 | Yes | |
Q9LVI6 | RLK90_ARATH | MetaPhors | A. thaliana | RLK902, At3g17840, MEB5.6 | Probable inactive receptor kinase RLK902 | 0/1 | 0 | 0 | 0 | No | |
Q9FXF2 | RKF1_ARATH | MetaPhors | A. thaliana | RKF1, At1g29750, F1N18.19, T3M22.1 | Probable LRR receptor-like serine/threonine-protein kinase RFK1, EC 2.7.11.1 | 0/1 | 0 | 0 | 0 | Yes | |
O04533 | LRK52_ARATH | MetaPhors | A. thaliana | LECRK52, LECRKB1, At1g70130, F20P5.15 | Putative L-type lectin-domain containing receptor kinase V.2, Arabidopsis thaliana lectin-receptor kinase b1, AthlecRK-b1, LecRK-V.2, EC 2.7.11.1 | 0/1 | 0 | 0 | 0 | Yes | |
Q07014 | LYN_RAT | OrthoDB | R. norvegicus | Lyn | Tyrosine-protein kinase Lyn, EC 2.7.10.2 | 1/3 | 0 | 2 | 0 | Yes | |
O22558 | STY8_ARATH | InParanoid | A. thaliana | STY8, At2g17700 | Serine/threonine-protein kinase STY8, EC 2.7.11.1 | 0/1 | 0 | 0 | 0 | Yes | |
F4JTP5 | STY46_ARATH | InParanoid | A. thaliana | STY46, At4g38470, F20M13.30 | Serine/threonine-protein kinase STY46, EC 2.7.11.1 | 0/1 | 0 | 0 | 0 | No | |
Q9ZQ31 | STY13_ARATH | InParanoid | A. thaliana | STY13, At2g24360, T28I24.9 | Serine/threonine-protein kinase STY13, EC 2.7.11.1 | 0/1 | 0 | 0 | 0 | Yes | |
Q9M085 | Q9M085_ARATH | InParanoid | A. thaliana | At4g31170, F6E21.90, F6E21_90 | AT4G31170 protein | 0/1 | 0 | 0 | 0 | Yes | |
Q8RWL6 | STY17_ARATH | InParanoid | A. thaliana | STY17, At4g35780, F8D20.290 | Serine/threonine-protein kinase STY17, EC 2.7.11.1 | 0/1 | 0 | 0 | 0 | No | |
Q2MHE4 | HT1_ARATH | InParanoid | A. thaliana | SUU, HT1, At1g62400, F24O1.13 | Serine/threonine/tyrosine-protein kinase HT1, EC 2.7.10.1, EC 2.7.11.1 | 0/1 | 0 | 0 | 0 | Yes | |
O22100 | O22100_ARATH | InParanoid | A. thaliana | F16M2_110, ATMRK1, At3g63260 | ATMRK1 | 1/1 | 0 | 1 | 0 | Yes | |
Q9LT56 | Q9LT56_ARATH | InParanoid | A. thaliana | ATN1, At3g27560 | AT3g27560/MMJ24_11 | 0/1 | 0 | 0 | 0 | Yes | |
Q9LUI6 | Q9LUI6_ARATH | InParanoid | A. thaliana | At3g22750 | Kinase-like protein | 0/1 | 0 | 0 | 0 | Yes | |
Q9FGS7 | Q9FGS7_ARATH | InParanoid | A. thaliana | At5g50180, K6A12.4, K6A12_4 | At5g50180 | 0/1 | 0 | 0 | 0 | Yes | |
Q9FM43 | Q9FM43_ARATH | InParanoid | A. thaliana | MNF13.60, MNF13_60, At5g40540 | Protein kinase ATN1 | 0/1 | 0 | 0 | 0 | Yes | |
O23334 | O23334_ARATH | InParanoid | A. thaliana | dl3430w, At4g14780, At4g14780/dl3430w, Dl3430W, FCAALL.308 | Kinase like protein | 0/1 | 0 | 0 | 0 | Yes | |
Q8L6Y9 | Q8L6Y9_ARATH | InParanoid | A. thaliana | At5g01850, T20L15.120, T20L15_120 | Protein kinase ATN1-like protein | 0/1 | 0 | 0 | 0 | No | |
Q9SSA4 | Q9SSA4_ARATH | InParanoid | A. thaliana | At3g01490, F4P13.4, F4P13_4 | AT3g01490/F4P13_4 | 0/1 | 0 | 0 | 0 | Yes | |
Q9FGB1 | Q9FGB1_ARATH | InParanoid | A. thaliana | MPF21.1, MPF21_1, At5g50000 | Protein kinase | 1/1 | 0 | 1 | 0 | Yes | |
O59790 | ARK1_SCHPO | MetaPhors | S. pombe | ark1, sex1, SPCC320.13c, SPCC330.16 | Serine/threonine-protein kinase ark1 | 1/1 | 0 | 1 | 0 | No | |
Q9UU87 | PPK34_SCHPO | MetaPhors | S. pombe | ppk34, SPCC1919.01, SPCC830.12 | Serine/threonine-protein kinase ppk34 | 0/1 | 0 | 0 | 0 | No | |
O74749 | HSE1_SCHPO | MetaPhors | S. pombe | hse1, SPBC1734.08 | Class E vacuolar protein-sorting machinery protein hse1 | 0/1 | 0 | 0 | 0 | No | |
P83099 | KPC4_DROME | MetaPhors | D. melanogaster | Pkcdelta, CG10524 | Putative protein kinase C delta type homolog, EC 2.7.11.13 | 0/1 | 0 | 0 | 0 | No | |
Q9FII5 | TDR_ARATH | MetaPhors | A. thaliana | TDR, PXY, At5g61480, MCI2.4 | Leucine-rich repeat receptor-like protein kinase TDR, EC 2.7.11.1 | 0/1 | 0 | 0 | 0 | Yes | |
O64783 | Y1137_ARATH | MetaPhors | A. thaliana | At1g61370, T1F9.14 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370, EC 2.7.11.1 | 0/1 | 0 | 0 | 0 | Yes | |
Q9SXB3 | Y1112_ARATH | MetaPhors | A. thaliana | At1g11280, T28P6.7 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g11280, EC 2.7.11.1 | 0/1 | 0 | 0 | 0 | Yes | |
O22932 | CIPKB_ARATH | MetaPhors | A. thaliana | CIPK11, PKS5, SIP4, SnRK3.22, At2g30360, T9D9.17 | CBL-interacting serine/threonine-protein kinase 11, EC 2.7.11.1 | 0/1 | 0 | 0 | 0 | No | |
P43298 | TMK1_ARATH | MetaPhors | A. thaliana | BLK1, TMK1, At1g66150, F15E12.4 | Receptor protein kinase TMK1, EC 2.7.11.1 | 0/1 | 0 | 0 | 0 | Yes | |
Q66GN2 | LRK64_ARATH | MetaPhors | A. thaliana | LECRK64, LECRKA4.3, At5g01560, F7A7.80 | Lectin-domain containing receptor kinase VI.4, LecRK-VI.4, EC 2.7.11.1 | 0/1 | 0 | 0 | 0 | Yes | |
Q96285 | LRK55_ARATH | MetaPhors | A. thaliana | LECRK55, LECRKA1, At3g59700, T16L24.250 | L-type lectin-domain containing receptor kinase V.5, Arabidopsis thaliana lectin-receptor kinase a1, Ath.lecRK1, AthlecRK-a1, LecRK-V.5, EC 2.7.11.1 | 0/1 | 0 | 0 | 0 | Yes | |
Q9LP77 | Y1848_ARATH | MetaPhors | A. thaliana | RKL1, At1g48480, T1N15.9 | Probable inactive receptor kinase At1g48480 | 1/1 | 0 | 1 | 0 | Yes | |
Q9M020 | LRK63_ARATH | MetaPhors | A. thaliana | LECRK63, LECRKA4.2, At5g01550, F7A7.70 | Lectin-domain containing receptor kinase VI.3, LecRK-VI.3, EC 2.7.11.1 | 0/1 | 0 | 0 | 0 | Yes | |
O49840 | PBL3_ARATH | MetaPhors | A. thaliana | PBL3, KIN2, PIX14, APK2B, At2g02800, T20F6.6 | Probable serine/threonine-protein kinase PBL3, EC 2.7.11.1 | 0/1 | 0 | 0 | 0 | Yes | |
Q7X8C5 | WAKLB_ARATH | MetaPhors | A. thaliana | WAKL2, At1g16130, T24D18.21 | Wall-associated receptor kinase-like 2, EC 2.7.11.- | 0/1 | 0 | 0 | 0 | Yes | |
Q9LSC2 | Y3589_ARATH | MetaPhors | A. thaliana | At3g15890, MVC8.1 | PTI1-like tyrosine-protein kinase At3g15890, EC 2.7.10.2 | 1/1 | 0 | 1 | 0 | Yes | |
Q9M0X5 | CRK25_ARATH | MetaPhors | A. thaliana | CRK25, At4g05200, C17L7.120, C6L9.3 | Cysteine-rich receptor-like protein kinase 25, Cysteine-rich RLK25, EC 2.7.11.- | 0/1 | 0 | 0 | 0 | Yes | |
O64778 | Y1142_ARATH | MetaPhors | A. thaliana | At1g61420, T1F9.9 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g61420, EC 2.7.11.1 | 0/1 | 0 | 0 | 0 | Yes | |
Q9ZR79 | LRK57_ARATH | MetaPhors | A. thaliana | LECRK57, LECRKA3, At3g59740, F24G16.10, T16L24.290 | L-type lectin-domain containing receptor kinase V.7, Arabidopsis thaliana lectin-receptor kinase a3, AthlecRK-a3, LecRK-V.7, EC 2.7.11.1 | 0/1 | 0 | 0 | 0 | No | |
B9DFG5 | PTI13_ARATH | MetaPhors | A. thaliana | PTI13, At3g59350, F25L23.210 | PTI1-like tyrosine-protein kinase 3, PTI1-3, EC 2.7.10.2 | 1/1 | 0 | 1 | 0 | Yes | |
C0LGD7 | Y1684_ARATH | MetaPhors | A. thaliana | At1g06840, F4H5.8 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840, EC 2.7.11.1 | 0/1 | 0 | 0 | 0 | Yes | |
F4JWD4 | F4JWD4_ARATH | MetaPhors | A. thaliana | At5g11020 | Protein kinase superfamily protein | 0/1 | 0 | 0 | 0 | Yes | |
A0A654FJB1 | A0A654FJB1_ARATH | MetaPhors | A. thaliana | AN1_LOCUS16363, C24_LOCUS16243 | Protein kinase domain-containing protein | 0/1 | 0 | 0 | 0 | No | |
A0A654FKI5 | A0A654FKI5_ARATH | MetaPhors | A. thaliana | AN1_LOCUS16800 | Receptor-like serine/threonine-protein kinase | 0/1 | 0 | 0 | 0 | No | |
F6UND7 | F6UND7_MOUSE | OrthoDB, Ensembl, OMA | M. musculus | Hck | Tyrosine-protein kinase | 0/23 | 0 | 0 | 0 | Yes | |
F1LP43 | F1LP43_RAT | OrthoDB, Ensembl | R. norvegicus | rCG_37428, Hck | Tyrosine-protein kinase | 0/3 | 0 | 0 | 0 | Yes | |
F1PSI2 | F1PSI2_CANLF | OrthoDB, Ensembl, InParanoid, OMA | C. familiaris | HCK | Tyrosine-protein kinase | 0/1 | 0 | 0 | 0 | Yes | |
F1MWN2 | F1MWN2_BOVIN | OrthoDB, Ensembl, InParanoid, MetaPhors, OMA | B. taurus | HCK | Tyrosine-protein kinase | 0/2 | 0 | 0 | 0 | Yes | |
P00528 | SRC64_DROME | OrthoDB, Ensembl, MetaPhors | D. melanogaster | Src64B, Src1, CG7524 | Tyrosine-protein kinase Src64B, Dsrc64, EC 2.7.10.2 | 0/1 | 0 | 0 | 0 | Yes | |
P50545 | HCK_RAT | Ensembl, InParanoid, MetaPhors, OMA | R. norvegicus | Hck | Tyrosine-protein kinase HCK, EC 2.7.10.2 | 0/3 | 0 | 0 | 0 | Yes | |
E2RBB8 | E2RBB8_CANLF | OrthoDB | C. familiaris | LYN | Tyrosine-protein kinase | 1/1 | 0 | 2 | 0 | Yes | |
P00522 | ABL_DROME | OrthoDB | D. melanogaster | Abl, ABL-1, Dash, CG4032 | Tyrosine-protein kinase Abl, EC 2.7.10.2 | 0/1 | 0 | 0 | 0 | No | |
Q8IIT5 | PTKL_PLAF7 | InParanoid | P. falciparum | pTKL, PF3D7_1106800 | Inactive protein tyrosine kinase pTKL | 0/1 | 0 | 0 | 0 | Yes |
ID of the experiment | Reference | Year | Organism | Cell type | Subcellular location | Technique(s) |
---|---|---|---|---|---|---|
SPalmE:430 | Robbins SM et al. | 1995 | Mus musculus | NIH-3T3 | Total cell lysate | Point mutation, [3H]palmitic acid labeling |
Isoforms | Position | Probability | Studies | Techniques |
---|---|---|---|---|
P08631-2 | 3 | NA | SPalmE:430 Robbins SM et al. (1995) | Point mutation, [3H]palmitic acid labeling |
Pos in alignment | 7 | 12 | 24 | 48 | 234 | 241 | 395 | 482 | 493 |
---|---|---|---|---|---|---|---|---|---|
Subcell. location | C | C | C | C | C | C | C | C | C |
Disulfide | no | no | no | no | no | no | no | no | no |
PSIPRED v.4.02 prediction | coil | coil | coil | coil | coil | coil | strand | coil | helix |
UniProt secondary structure | NA | NA | NA | NA | strand | NA | strand | strand | helix |
Pos in isoform 1 [Main]
CSS-Palm 4.0 PalmPred |
Cys7 HC |
Cys12 MC |
Cys24 LC |
Cys48 |
Cys234 |
Cys241 |
Cys395 HC |
Cys482 |
Cys493 MC |
Pos in isoform 2
CSS-Palm 4.0 PalmPred |
Cys3 HC HC |
Cys27 |
Cys213 |
Cys220 |
Cys374 HC |
Cys461 |
Cys472 MC |
||
Pos in isoform 3
CSS-Palm 4.0 PalmPred |
Cys3 HC HC |
Cys27 |
Cys212 |
Cys219 |
Cys373 HC |
Cys460 |
Cys471 MC |
||
Pos in isoform 4
CSS-Palm 4.0 PalmPred |
Cys7 HC |
Cys12 MC |
Cys24 MC |
Cys48 |
Cys233 |
Cys240 |
Cys394 HC |
Cys481 |
Cys492 MC |
Legend
Subcell. location | U Undefined E Extracellular/Lumenal T Transmembrane C Cytosolic/Nuclear |
Prediction confidence |
Cysteine position:
Predicted (high confidence prediction with CSS-Palm or/and PalmPred) and validated (in terms of disulfide bonds and cellular location) / Predicted but not validated (in terms of disulfide bond and cellular location) / Not predicted CSS-Palm 4.0: High confidence, Medium confidence, Low confidence, Not predicted. PalmPred: High confidence (score > 0.4), Medium confidence (0.1 < score < 0.4), Low confidence (score < 0.1), Not predicted. |
List of palmitoyl-proteomes
Summary table by organism
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ID of the experiment | Reference | Year | Organism | Cell type | Subcellular location | Technique(s) | Found? | In list | All lists |
---|---|---|---|---|---|---|---|---|---|
SPalmE:14 | Roth AF et al. | 2006 | Saccharomyces cerevisiae | Isogenic LRB759 | Total membrane | ABE | x | HC HC: 48 hits | |
SPalmE:13 | Kang R et al. | 2008 | Rattus norvegicus | Cortical neuron | Synaptosomal membrane | ABE | x |
HC: 107 hits LC: 308 hits |
|
SPalmE:6 | Martin BR et al. | 2009 | Homo sapiens | Jurkat | Total membrane | Click chemistry | x |
HC: 127 hits LC: 188 hits List: 0 hits |
|
SPalmE:1 | Yang W et al. | 2010 | Homo sapiens | DU145 | Total membrane | ABE | x |
HC: 162 hits LC: 218 hits |
|
SPalmE:10 | Yount JS et al. | 2010 | Mus musculus | Dendritic cell | Total cell lysate | Click chemistry | Ortholog | in LC [LYN, HCK] |
HC: 59 hits LC: 105 hits |
SPalmE:578 | Yang W et al. | 2010 | Homo sapiens | DU145 | Lipid raft | ABE | x |
HC: 102 hits LC: 73 hits |
|
SPalmE:577 | Yang W et al. | 2010 | Homo sapiens | DU145 | Non-lipid raft | ABE | x |
HC: 63 hits LC: 147 hits |
|
SPalmE:12 | Martin BR et al. | 2011 | Mus musculus | BW5147-derived mouse T-cell hybridoma cell | Total membrane | Click chemistry | x |
HC HC: 352 hits LC LC: 8 hits |
|
SPalmE:2 | Dowal L et al. | 2011 | Homo sapiens | Platelet | Total membrane | ABE | x | List: 214 hits | |
SPalmE:8 | Merrick BA et al. | 2011 | Mus musculus | Macrophage Raw 264.7 | Total membrane | ABE | Ortholog | in List [LYN, HCK] | List: 69 hits |
SPalmE:511 | Emmer BT et al. | 2011 | Trypanosoma brucei brucei | NA | Total cell lysate | ABE | x | List: 126 hits | |
SPalmE:5 | Forrester MT et al. | 2011 | Homo sapiens | HEK293 | Total membrane | ARAC | x | List: 69 hits | |
SPalmE:7 | Wilson JP et al. | 2011 | Homo sapiens | Jurkat | Total cell lysate | Click chemistry | x |
HC: 164 hits LC: 178 hits |
|
SPalmE:3 | Ivaldi C et al. | 2012 | Homo sapiens | B-cell | Total membrane | ABE | x | HC HC: 93 hits | |
SPalmE:580 | Jones ML et al. | 2012 | Plasmodium falciparum | Whole organism | Total cell lysate | Click chemistry, SILAC | x |
HC: 79 hits LC: 89 hits |
|
SPalmE:162 | Jones ML et al. | 2012 | Plasmodium falciparum | Whole organism | Total cell lysate | ABE | x |
HC: 100 hits LC: 217 hits |
|
SPalmE:11 | Li Y et al. | 2012 | Mus musculus | Neural stem cell | Total cell lysate | Click chemistry | Ortholog | in HC [LYN, HCK] | HC HC: 254 hits |
SPalmE:4 | Marin EP et al. | 2012 | Homo sapiens | Umbilical vein blood | NA | ABE | x | List: 154 hits | |
SPalmE:9 | Ren W et al. | 2013 | Mus musculus | 3T3-L1 and epididymal fat pads | Total membrane | ARAC | x | List: 664 hits | |
SPalmE:15 | Hemsley PA et al. | 2013 | Arabidopsis thaliana | Heyn Col-4 ecotype root cell suspension | Microsomal membrane | ABE | Ortholog | in LC,HC,MC [Q9FGB1, O22100, PTI13, Y1848, Y3589] |
HC: 122 hits MC: 94 hits LC: 366 hits |
SPalmE:119 | Wan J et al. | 2013 | Mus musculus | Brain | Total cell lysate | ABE | x | List: 378 hits | |
SPalmE:160 | Zhang MM et al. | 2013 | Schizosaccharomyces pombe | Whole organism | Total cell lysate | Click chemistry | Ortholog | in List [ARK1] | List: 238 hits |
SPalmE:507 | Chesarino NM et al. | 2014 | Mus musculus | DC2.4 | Total cell lysate | Click chemistry | Ortholog | in List [LYN, HCK] | List: 246 hits |
SPalmE:508 | Chesarino NM et al. | 2014 | Mus musculus | MEF | Total cell lysate | Click chemistry | x | List: 436 hits | |
SPalmE:184 | Wei X et al. | 2014 | Homo sapiens | HUVEC | Total cell lysate | ABE | x |
Palm decreased: 40 hits Palm increased: 33 hits List: 367 hits |
|
SPalmE:619 | Peng T et al. | 2015 | Homo sapiens | HEK293 | Total cell lysate | Alk16 Labeling | x | List: 354 hits | |
SPalmE:504 | Serwa RA et al. | 2015 | Homo sapiens | RPE-1 | Total cell lysate | SILAC, 16-HDYA labeling | x | List: 1348 hits | |
SPalmE:620 | Peng T et al. | 2015 | Homo sapiens | HEK293 | Total cell lysate | Photo cleavable x-alk16 labeling | x | List: 354 hits | |
SPalmE:506 | Morrison E et al. | 2015 | Homo sapiens | Jurkat | Total cell lysate | Click chemistry, SILAC | x | List: 226 hits | |
SPalmE:540 | Gould NS et al. | 2015 | Mus musculus | Liver | Total cell lysate | APE | x | List: 780 hits | |
SPalmE:529 | Colquhoun DR et al. | 2015 | Homo sapiens | 174 x CEM.T1 | Total cell lysate | Click-IT Palmitic Acid labeling | x | List: 113 hits | |
SPalmE:510 | Santiago-Tirado FH et al. | 2015 | Cryptococcus neoformans | NA | Total cell lysate | Click chemistry | x | List: 354 hits | |
SPalmE:509 | Santiago-Tirado FH et al. | 2015 | Cryptococcus neoformans | NA | Total cell lysate | Click chemistry | x | List: 426 hits | |
SPalmE:505 | Morrison E et al. | 2015 | Homo sapiens | Primary CD4 + T cells | Total cell lysate | ABE, In gel SILAC labeling | x | List: 274 hits | |
SPalmE:536 | Foe IT et al. | 2015 | Toxoplasma gondii | NA | Total membrane | Click chemistry | x |
HC: 210 hits MC: 72 hits |
|
SPalmE:902 | Caballero MC et al. | 2016 | Toxoplasma gondii | whole parasite lysates | NA | ABE | x | HC: 164 hits | |
SPalmE:829 | Upadhyay S et al. | 2016 | Aspergillus fumigatus | Conidia | NA | ABE | x | List: 133 hits | |
SPalmE:724 | Fang C et al. | 2016 | Homo sapiens | SW480 | NA | ARAC | x | List: 100 hits | |
SPalmE:909 | Thinon E et al. | 2016 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | Alk16 Labeling | Ortholog | in HC [LYN, HCK] |
HC: 197 hits MC: 143 hits LC: 302 hits |
SPalmE:723 | Hernandez JL et al. | 2016 | Homo sapiens | MCF7 | Total cell lysate | Alk16 Labeling | x | List: 1353 hits | |
SPalmE:698 | Pinner AL et al. | 2016 | Homo sapiens | Brain | Total cell lysate | ABE | x | List: 216 hits | |
SPalmE:993 | Shen LF et al. | 2017 | Mus musculus | Liver | Total membrane | ARAC | x | ZDHHC13 substrates: 16 hits | |
SPalmE:903 | Collins MO et al. | 2017 | Mus musculus | Forebrain | NA | ABE | x | HC: 1079 hits | |
SPalmE:907 | Edmonds MJ et al. | 2017 | Rattus norvegicus | Brain | NA | ARAC | x | List: 95 hits | |
SPalmE:906 | Edmonds MJ et al. | 2017 | Rattus norvegicus | Brain | NA | ABE | x | List: 193 hits | |
SPalmE:855 | Shen LF et al. | 2017 | Mus musculus | Liver | Total membrane | ARAC | Ortholog | in List [LYN, HCK] | List: 865 hits |
SPalmE:1183 | Thinon E et al. | 2018 | Homo sapiens | HeLa | Total cell lysate | NH2OH cleavage of thioester bond, Alk16 Labeling | x |
HC: 132 hits MC: 138 hits LC: 110 hits |
|
SPalmE:1184 | Thinon E et al. | 2018 | Homo sapiens | HeLa | Total cell lysate | ARAC | x |
HC: 545 hits MC: 415 hits LC: 219 hits |
|
SPalmE:1182 | Thinon E et al. | 2018 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | ARAC | Ortholog | in HC [LYN, HCK] |
HC: 198 hits MC: 143 hits LC: 120 hits |
SPalmE:1186 | Thinon E et al. | 2018 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | NH2OH cleavage of thioester bond, Alk16 Labeling | Ortholog | in HC [LYN, HCK] |
HC: 177 hits MC: 162 hits LC: 123 hits |
SPalmE:1181 | Thinon E et al. | 2018 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | NH2OH cleavage of thioester bond, Alk16 Labeling | Ortholog | in HC [LYN, HCK] |
HC: 244 hits MC: 187 hits LC: 120 hits |
SPalmE:1191 | Won SJ et al. | 2018 | Homo sapiens | HEK293T | Total cell lysate | Click chemistry | x | List: 195 hits | |
SPalmE:1192 | Won SJ et al. | 2018 | Homo sapiens | HAP1 | Total cell lysate | Click chemistry | x | List: 984 hits | |
SPalmE:1193 | Won SJ et al. | 2018 | Homo sapiens | HAP1 | Total cell lysate | ARAC | x | List: 1394 hits | |
SPalmE:1194 | Won SJ et al. | 2018 | Homo sapiens | HAP1 | Total cell lysate | ARAC, | x | List: 1404 hits | |
SPalmE:1203 | Zhang X et al. | 2018 | Mus musculus | Brain | Total membrane | Enrichment by magnetic nanoparticles | x |
HC: 917 hits MC: 352 hits LC: 15 hits |
|
SPalmE:1259 | Dumoulin A et al. | 2018 | Mus musculus | F11 | Total membrane | ABE, NH2OH cleavage of thioester bond, LC-MS | x |
HC: 1 hits MC: 10 hits LC: 4 hits |
|
SPalmE:1260 | Wang Z et al. | 2018 | Bos taurus | Lens fiber cell | Total cell lysate | ABE, NH2OH cleavage of thioester bond, LC-MS | x | List: 52 hits | |
SPalmE:920 | Sobocińska J et al. | 2018 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | Click chemistry | Ortholog | in LPS treatment [LYN, HCK] | LPS treatment: 646 hits |
SPalmE:919 | Sobocińska J et al. | 2018 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | Click chemistry | Ortholog | in List [LYN, HCK] | List: 646 hits |
SPalmE:908 | Sobocińska J et al. | 2018 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | Click chemistry | Ortholog | in Palm. up with LPS [LYN, HCK] |
Palm. up with LPS: 156 hits Palm. down with LPS: 189 hits |
SPalmE:1185 | Thinon E et al. | 2018 | Homo sapiens | HeLa | Total cell lysate | NH2OH cleavage of thioester bond, LC-MS, Alk16 Labeling | x |
Chymotrypsin: 286 hits Trypsin: 1291 hits |
|
SPalmE:1187 | Thinon E et al. | 2018 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | ARAC | Ortholog | in HC [LYN, HCK] |
HC: 281 hits MC: 139 hits LC: 113 hits |
SPalmE:1303 | Zaręba-Kozioł M et al. | 2019 | Mus musculus | Brain | Postsynaptic density fraction | ABE, NH2OH cleavage of thioester bond, LC-MS | x | ||
SPalmE:1270 | Strassburger K et al. | 2019 | Drosophila melanogaster | Circa 160 L2 larvae | Total cell lysate | ABE, NH2OH cleavage of thioester bond, PAT KO, MS | x | List: 13 hits | |
SPalmE:1266 | Strassburger K et al. | 2019 | Drosophila melanogaster | Circa 160 L2 larvae | Total cell lysate | ABE, NH2OH cleavage of thioester bond, PAT KO, MS | x | List: 157 hits | |
SPalmE:1265 | Wang J et al. | 2019 | Mus musculus | 3T3-L1 | Total membrane | MS, BioID | x | List: 9 hits | |
SPalmE:1333 | Zaręba-Kozioł M et al. | 2019 | Mus musculus | Brain | Postsynaptic density fraction | ABE, NH2OH cleavage of thioester bond, LC-MS | x | ||
SPalmE:1433 | Zhou B et al. | 2019 | Homo sapiens | LNCaP | Total cell lysate | NH2OH cleavage of thioester bond, LC-MS, LB-ABE, ABE | x | List: 2929 hits | |
SPalmE:1432 | Zhou B et al. | 2019 | Homo sapiens | LNCaP | Total cell lysate | ABE, SILAC, NH2OH cleavage of thioester bond, LC-MS | x | List: 590 hits | |
SPalmE:1434 | Wegleiter T et al. | 2019 | Mus musculus | Neural stem cell | Total cell lysate | ABE, NH2OH cleavage of thioester bond, LC-MS | Ortholog | in List [LYN, HCK] | List: 370 hits |
SPalmE:1438 | Mariscal J et al. | 2020 | Homo sapiens | PC3 | Total membrane | ARAC, NH2OH cleavage of thioester bond, LC-MS, LB-ABE | x | HC: 1837 hits | |
SPalmE:1439 | Mariscal J et al. | 2020 | Homo sapiens | PC3 | Large Extracellular Vesicles | ARAC, NH2OH cleavage of thioester bond, LC-MS, LB-ABE | x | HC: 1350 hits | |
SPalmE:1440 | Mariscal J et al. | 2020 | Homo sapiens | PC3 | Small Extracellular Vesicles | ARAC, NH2OH cleavage of thioester bond, LC-MS, LB-ABE | x | HC: 600 hits | |
SPalmE:1435 | Morrison E et al. | 2020 | Homo sapiens | Jurkat | Total cell lysate | ABE, NH2OH cleavage of thioester bond, LC-MS, SILAC | x | Unstimulated: 37 hits | |
SPalmE:1436 | Morrison E et al. | 2020 | Homo sapiens | Jurkat | Total cell lysate | ABE, NH2OH cleavage of thioester bond, LC-MS, SILAC | x | List: 185 hits | |
SPalmE:1458 | Morrison E et al. | 2020 | Homo sapiens | Jurkat | Total cell lysate | ABE, NH2OH cleavage of thioester bond, LC-MS, SILAC | x | Stimulated: 148 hits | |
SPalmE:1437 | Mariscal J et al. | 2020 | Homo sapiens | PC3 | Total cell lysate | ARAC, NH2OH cleavage of thioester bond, LC-MS, LB-ABE | x | HC: 1869 hits | |
SPalmE:1450 | Zaręba-Kozioł M et al. | 2021 | Mus musculus | Brain | Synaptoneurosomal fraction | ABE, NH2OH cleavage of thioester bond, LC-MS | x | List: 1093 hits | |
SPalmE:1444 | Miles MR et al. | 2021 | Homo sapiens | Heart | Total cell lysate | ARAC, NH2OH cleavage of thioester bond, LC-MS | x | List: 687 hits | |
SPalmE:1447 | Pradhan AJ et al. | 2021 | Homo sapiens | HT-29 | Total cell lysate | Labeling of substrate with C20 AlkFA (Alk-18), LC-MS | x | List: 1173 hits | |
SPalmE:1448 | Pradhan AJ et al. | 2021 | Homo sapiens | HT-29 | Total cell lysate | Labeling of substrate with C20 AlkFA (Alk-18), LC-MS | x | List: 770 hits | |
SPalmE:1449 | Ripamonti M et al. | 2021 | Mus musculus | NIH-3T3 | Total cell lysate | ARAC, NH2OH cleavage of thioester bond, LC-MS | x | List: 199 hits | |
SPalmE:1445 | Miles MR et al. | 2021 | Rattus norvegicus | Heart | Total cell lysate | ARAC, NH2OH cleavage of thioester bond, LC-MS | Ortholog | in List [LYN] | List: 399 hits |
SPalmE:1451 | Zaręba-Kozioł M et al. | 2021 | Mus musculus | Brain | Synaptoneurosomal fraction | ABE, NH2OH cleavage of thioester bond, LC-MS | x | List: 1048 hits | |
SPalmE:1452 | Zaręba-Kozioł M et al. | 2021 | Mus musculus | Brain | Synaptoneurosomal fraction | ABE, NH2OH cleavage of thioester bond, LC-MS | x | List: 1112 hits | |
SPalmE:1453 | Zaręba-Kozioł M et al. | 2021 | Mus musculus | Brain | Synaptoneurosomal fraction | ABE, NH2OH cleavage of thioester bond, LC-MS | x | List: 1040 hits | |
SPalmE:1455 | Ziemlińska E et al. | 2021 | Mus musculus | Liver | Total membrane | ABE, NH2OH cleavage of thioester bond, LC-MS | Ortholog | in HC [LYN, HCK] |
HC: 850 hits MC: 303 hits LC: 21 hits |
SPalmE:1446 | Miles MR et al. | 2021 | Canis familiaris | Heart | Total cell lysate | ARAC, NH2OH cleavage of thioester bond, LC-MS | Ortholog | in List [E2RBB8] | List: 464 hits |
SPalmE:1454 | Ziemlińska E et al. | 2021 | Mus musculus | Liver | Total membrane | ABE, NH2OH cleavage of thioester bond, LC-MS | Ortholog | in HC [LYN, HCK] |
HC: 675 hits MC: 360 hits LC: 27 hits |
SPalmE:1443 | Uzbekova S et al. | 2021 | Bos taurus | Bovine follicular cells | Total cell lysate | ABE, NH2OH cleavage of thioester bond, LC-MS | x | List: 80 hits | |
SPalmE:1456 | Gao J et al. | 2022 | Mus musculus | Testis | Total cell lysate | ABE, NH2OH cleavage of thioester bond, LC-MS | x | HC: 4107 hits | |
SPalmE:1442 | Gorenberg EL et al. | 2022 | Mus musculus | Brain | Total cell lysate | ARAC, NH2OH cleavage of thioester bond, LC-MS | x | List: 1597 hits | |
SPalmE:1441 | Gorenberg EL et al. | 2022 | Mus musculus | Brain | Synaptic fraction | ARAC, NH2OH cleavage of thioester bond, LC-MS | x | List: 1378 hits | |
SPalmE:1457 | Gao J et al. | 2022 | Mus musculus | Testis | Total cell lysate | ABE, NH2OH cleavage of thioester bond, LC-MS | x | HC: 3870 hits |
Summary table by organism
Organism | Total number of palmitoyl-proteome articles | Total number of palmitoyl-proteomes | Number of palmitoyl-proteomes containing this protein or an ortholog | % of palmitoyl-proteomes containing this protein or an ortholog | Orthologs |
---|---|---|---|---|---|
S. cerevisiae S288c | 1 | 1 | 0 | 0.0 | NA |
R. norvegicus | 3 | 4 | 1 | 25.0 | LYN_RAT |
H. sapiens | 22 | 38 | 0 | 0.0 | NA |
M. musculus | 23 | 37 | 16 | 43.2 | LYN_MOUSE , HCK_MOUSE |
T. brucei brucei | 1 | 1 | 0 | 0.0 | NA |
P. falciparum | 1 | 2 | 0 | 0.0 | NA |
A. thaliana | 1 | 1 | 1 | 100.0 | Q9FGB1_ARATH , O22100_ARATH , PTI13_ARATH , Y1848_ARATH , Y3589_ARATH |
S. pombe | 1 | 1 | 1 | 100.0 | ARK1_SCHPO |
C. neoformans var. grubii serotype A strain H99 | 1 | 2 | 0 | 0.0 | NA |
T. gondii | 2 | 2 | 0 | 0.0 | NA |
A. fumigatus | 1 | 1 | 0 | 0.0 | NA |
B. taurus | 2 | 2 | 0 | 0.0 | NA |
D. melanogaster | 1 | 2 | 0 | 0.0 | SRC64_DROME |
C. familiaris | 1 | 1 | 1 | 100.0 | E2RBB8_CANLF |