General info Cross-references Sequences Orthologs Ortholog sequences Predictions Palmitoyl-proteomes References
Palmitoyl-proteomes
8/22
articles for human
10 orthologs
10 orthologs
Validation experiments
0
experiment
0 ortholog
0 ortholog
Curated sites & Enzymes
0
site from validation experiments*
0 site from palmitoyl-proteomes*
No PAT known
No APT known
*In main isoform only
0 site from palmitoyl-proteomes*
No PAT known
No APT known
*In main isoform only
Predictions
Not predicted
Protein names
Plasma membrane calcium-transporting ATPase 4, PMCA4, EC 7.2.2.10; Matrix-remodeling-associated protein 1; Plasma membrane calcium ATPase isoform 4; Plasma membrane calcium pump isoform 4
Subcellular location
Cell membrane (By similarity); Cell projection; cilium; flagellum membrane; Cilium (Potential); Flagellum membrane (Potential)
Isoforms & protein length
Isoform 1 (main): 1241 aa; Isoform 2 : 1170 aa; Isoform 3 : 1158 aa; Isoform 4 : 1134 aa; Isoform 5 : 1122 aa; Isoform 6 : 1205 aa; Isoform 7 : 1193 aa; Isoform 8 : 1229 aa
Known functions
Source | Identifiers |
---|---|
UniProt gene names | ATP2B4, ATP2B2, MXRA1, Atp2b4 |
UniProt secondary AC | B1APW5, B1APW6, Q13450, Q13452, Q13455, Q16817, Q7Z3S1 |
Refseq protein ID | NP_001001396.1, NP_001675.3, XP_005245281.1, XP_005245283.1 |
IPI ID | IPI00012490, IPI00217164, IPI00217165, IPI00217166, IPI00217168, IPI00217169, IPI00217170, IPI00217171, IPI00856079, IPI00017792 |
Source | Identifiers |
---|---|
Ensembl protein | ENSP00000340930, ENSP00000350310, ENSP00000356187, ENSP00000356188, ENSP00000375816 |
Ensembl gene | ENSG00000058668 |
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UniProt feature viewer
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UniProt AC | st. | UniProt ID | Orthology source | Organism | Gene names | Protein name | Palmitome articles | Times validated | Techniques | Sites | Predicted |
---|---|---|---|---|---|---|---|---|---|---|---|
P11505 | AT2B1_RAT | OrthoDB | R. norvegicus | Atp2b1 | Plasma membrane calcium-transporting ATPase 1, EC 7.2.2.10 | 2/3 | 0 | 2 | 0 | No | |
Q9M2L4 | ACA11_ARATH | OMA, InParanoid | A. thaliana | ACA11, At3g57330, F28O9.180 | Putative calcium-transporting ATPase 11, plasma membrane-type, EC 7.2.2.10 | 1/1 | 0 | 1 | 0 | Yes | |
Q37145 | ACA1_ARATH | OMA, InParanoid | A. thaliana | ACA1, PEA1, At1g27770, F28L5.1, T22C5.23 | Calcium-transporting ATPase 1, EC 7.2.2.10 | 1/1 | 0 | 1 | 0 | No | |
Q9R0K7 | AT2B2_MOUSE | OrthoDB | M. musculus | Atp2b2, Pmca2 | Plasma membrane calcium-transporting ATPase 2, PMCA2, EC 7.2.2.10 | 4/23 | 0 | 2 | 0 | Yes | |
F1MQ01 | F1MQ01_BOVIN | Ensembl, OMA, InParanoid | B. taurus | ATP2B4 | Calcium-transporting ATPase | 0/2 | 0 | 0 | 0 | No | |
E9Q828 | E9Q828_MOUSE | Ensembl, OrthoDB | M. musculus | Atp2b4 | Calcium-transporting ATPase | 1/23 | 0 | 2 | 0 | No | |
F1LSX8 | F1LSX8_RAT | Ensembl, OrthoDB | R. norvegicus | Atp2b4 | Calcium-transporting ATPase | 0/3 | 0 | 0 | 0 | No | |
Q64542 | AT2B4_RAT | Ensembl, InParanoid, OMA | R. norvegicus | Atp2b4 | Plasma membrane calcium-transporting ATPase 4, PMCA4, EC 7.2.2.10 | 0/3 | 0 | 0 | 0 | No | |
Q9V4C7 | Q9V4C7_DROME | Ensembl | D. melanogaster | BEST:CK, BEST:CK01140, BEST:CK02288, BP1021, CG2165, CG34036, CK02288, Dmel\CG42314, PMCA, CG42314, Dmel_CG42314 | Calcium-transporting ATPase | 0/1 | 0 | 0 | 0 | No | |
E6EK18 | E6EK18_DROME | Ensembl | D. melanogaster | BEST:CK, BEST:CK01140, BEST:CK02288, BP1021, CG2165, CG34036, CK02288, Dmel\CG42314, PMCA, CG42314, Dmel_CG42314 | Calcium-transporting ATPase | 0/1 | 0 | 0 | 0 | No | |
Q59DQ0 | Q59DQ0_DROME | Ensembl | D. melanogaster | BEST:CK, BEST:CK01140, BEST:CK02288, BP1021, CG2165, CG34036, CK02288, Dmel\CG42314, PMCA, CG42314, Dmel_CG42314 | Calcium-transporting ATPase | 0/1 | 0 | 0 | 0 | No | |
E6EK17 | E6EK17_DROME | Ensembl | D. melanogaster | BEST:CK, BEST:CK01140, BEST:CK02288, BP1021, CG2165, CG34036, CK02288, Dmel\CG42314, PMCA, CG42314, Dmel_CG42314 | Calcium-transporting ATPase | 0/1 | 0 | 0 | 0 | No | |
G5E829 | AT2B1_MOUSE | OrthoDB | M. musculus | Atp2b1, mCG_13663 | Plasma membrane calcium-transporting ATPase 1, EC 7.2.2.10 | 5/23 | 0 | 2 | 0 | No | |
Q9LF79 | ACA8_ARATH | InParanoid | A. thaliana | ACA8, At5g57110, MUL3.5 | Calcium-transporting ATPase 8, plasma membrane-type, EC 7.2.2.10 | 1/1 | 0 | 1 | 0 | No | |
Q9SZR1 | ACA10_ARATH | InParanoid | A. thaliana | ACA10, At4g29900, F27B13.140 | Calcium-transporting ATPase 10, plasma membrane-type, EC 7.2.2.10 | 1/1 | 0 | 1 | 0 | No | |
Q9LU41 | ACA9_ARATH | InParanoid | A. thaliana | ACA9, At3g21180, MXL8.3 | Calcium-transporting ATPase 9, plasma membrane-type, EC 7.2.2.10 | 0/1 | 0 | 0 | 0 | Yes | |
O81108 | ACA2_ARATH | InParanoid | A. thaliana | ACA2, At4g37640, F19F18.130 | Calcium-transporting ATPase 2, plasma membrane-type, EC 7.2.2.10 | 0/1 | 0 | 0 | 0 | Yes | |
Q9LY77 | ACA12_ARATH | InParanoid | A. thaliana | ACA12, At3g63380, MAA21_10 | Calcium-transporting ATPase 12, plasma membrane-type, EC 7.2.2.10 | 0/1 | 0 | 0 | 0 | No | |
Q9LIK7 | ACA13_ARATH | InParanoid | A. thaliana | ACA13, At3g22910, F5N5.8 | Putative calcium-transporting ATPase 13, plasma membrane-type, EC 7.2.2.10 | 0/1 | 0 | 0 | 0 | No | |
Q0VF55 | Q0VF55_MOUSE | OrthoDB | M. musculus | Atp2b3 | Calcium-transporting ATPase | 1/23 | 0 | 2 | 0 | No | |
F1PHQ7 | F1PHQ7_CANLF | OrthoDB, OMA, Ensembl, InParanoid | C. familiaris | ATP2B4 | Calcium-transporting ATPase | 0/1 | 0 | 0 | 0 | No | |
F1MS16 | F1MS16_BOVIN | OrthoDB | B. taurus | ATP2B3 | Calcium-transporting ATPase | 0/2 | 0 | 0 | 0 | No | |
E6EK15 | E6EK15_DROME | OrthoDB, Ensembl | D. melanogaster | BEST:CK, BEST:CK01140, BEST:CK02288, BP1021, CG2165, CG34036, CK02288, Dmel\CG42314, PMCA, CG42314, Dmel_CG42314 | Calcium-transporting ATPase | 0/1 | 0 | 0 | 0 | No | |
Q53XI0 | Q53XI0_ARATH | OMA | A. thaliana | Calcium-transporting ATPase | 0/1 | 0 | 0 | 0 | Yes | ||
O64806 | ACA7_ARATH | OMA, InParanoid | A. thaliana | ACA7, At2g22950, T20K9.16 | Putative calcium-transporting ATPase 7, plasma membrane-type, EC 7.2.2.10 | 0/1 | 0 | 0 | 0 | Yes | |
O22218 | ACA4_ARATH | OMA, InParanoid | A. thaliana | ACA4, At2g41560, T32G6.8 | Calcium-transporting ATPase 4, plasma membrane-type, EC 7.2.2.10 | 0/1 | 0 | 0 | 0 | Yes | |
Q0WV19 | Q0WV19_ARATH | OMA | A. thaliana | At5g57110 | Calcium-transporting ATPase | 0/1 | 0 | 0 | 0 | No | |
Q6Q477 | AT2B4_MOUSE | OMA, Ensembl, InParanoid | M. musculus | Atp2b4 | Plasma membrane calcium-transporting ATPase 4, PMCA4, EC 7.2.2.10 | 1/23 | 0 | 2 | 0 | No | |
J9PB54 | J9PB54_CANLF | OrthoDB | C. familiaris | ATP2B2 | Calcium-transporting ATPase | 0/1 | 0 | 0 | 0 | Yes | |
Q9HDW7 | ATC2_SCHPO | InParanoid | S. pombe | pmc1, SPAPB2B4.04c | Calcium-transporting ATPase 2 | 0/1 | 0 | 0 | 0 | No | |
P38929 | ATC2_YEAST | InParanoid | S. cerevisiae S288c | PMC1, YGL006W | Calcium-transporting ATPase 2, EC 7.2.2.10 | 0/1 | 0 | 0 | 0 | Yes |
Pos in alignment | 24 | 55 | 132 | 182 | 398 | 453 | 463 | 537 | 601 | 632 | 639 | 664 | 685 | 710 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Subcell. location | C | C | E | C | E | C | C | C | C | C | C | C | C | C |
Disulfide | no | no | no | no | no | no | no | no | no | no | no | no | no | no |
PSIPRED v.4.02 prediction | coil | helix | coil | helix | coil | helix | strand | helix | coil | helix | strand | strand | helix | coil |
UniProt secondary structure | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA |
Pos in isoform 1 [Main]
CSS-Palm 4.0 PalmPred |
Cys24 |
Cys55 |
Cys132 |
Cys182 |
Cys398 |
Cys453 |
Cys463 |
Cys537 |
Cys601 |
Cys632 |
Cys639 |
Cys664 |
Cys685 |
Cys710 |
Pos in isoform 2
CSS-Palm 4.0 PalmPred |
Cys24 |
Cys55 |
Cys132 |
Cys182 |
Cys398 |
Cys453 |
Cys463 |
Cys537 |
Cys601 |
Cys632 |
Cys639 |
Cys664 |
Cys685 |
Cys710 |
Pos in isoform 3
CSS-Palm 4.0 PalmPred |
Cys24 |
Cys55 |
Cys132 |
Cys182 |
Cys386 |
Cys441 |
Cys451 |
Cys525 |
Cys589 |
Cys620 |
Cys627 |
Cys652 |
Cys673 |
Cys698 |
Pos in isoform 4
CSS-Palm 4.0 PalmPred |
Cys24 |
Cys55 |
Cys132 |
Cys182 |
Cys398 |
Cys453 |
Cys463 |
Cys537 |
Cys601 |
Cys632 |
Cys639 |
Cys664 |
Cys685 |
Cys710 |
Pos in isoform 5
CSS-Palm 4.0 PalmPred |
Cys24 |
Cys55 |
Cys132 |
Cys182 |
Cys386 |
Cys441 |
Cys451 |
Cys525 |
Cys589 |
Cys620 |
Cys627 |
Cys652 |
Cys673 |
Cys698 |
Pos in isoform 6
CSS-Palm 4.0 PalmPred |
Cys24 |
Cys55 |
Cys132 |
Cys182 |
Cys398 |
Cys453 |
Cys463 |
Cys537 |
Cys601 |
Cys632 |
Cys639 |
Cys664 |
Cys685 |
Cys710 |
Pos in isoform 7
CSS-Palm 4.0 PalmPred |
Cys24 |
Cys55 |
Cys132 |
Cys182 |
Cys386 |
Cys441 |
Cys451 |
Cys525 |
Cys589 |
Cys620 |
Cys627 |
Cys652 |
Cys673 |
Cys698 |
Pos in isoform 8
CSS-Palm 4.0 PalmPred |
Cys24 |
Cys55 |
Cys132 |
Cys182 |
Cys386 |
Cys441 |
Cys451 |
Cys525 |
Cys589 |
Cys620 |
Cys627 |
Cys652 |
Cys673 |
Cys698 |
Pos in alignment | 721 | 863 | 998 | 1007 | 1021 | 1032 | 1224 |
---|---|---|---|---|---|---|---|
Subcell. location | C | E | T | T | E | T | C |
Disulfide | no | no | no | no | no | no | no |
PSIPRED v.4.02 prediction | strand | helix | helix | helix | coil | helix | |
UniProt secondary structure | NA | NA | NA | NA | NA | NA | |
Pos in isoform 1 [Main]
CSS-Palm 4.0 PalmPred |
Cys721 |
Cys863 |
Cys998 |
Cys1007 |
Cys1021 |
Cys1032 |
Cys1222 |
Pos in isoform 2
CSS-Palm 4.0 PalmPred |
Cys721 |
Cys863 |
Cys998 |
Cys1007 |
Cys1021 |
Cys1032 |
|
Pos in isoform 3
CSS-Palm 4.0 PalmPred |
Cys709 |
Cys851 |
Cys986 |
Cys995 |
Cys1009 |
Cys1020 |
|
Pos in isoform 4
CSS-Palm 4.0 PalmPred |
Cys721 |
Cys863 |
Cys998 |
Cys1007 |
|||
Pos in isoform 5
CSS-Palm 4.0 PalmPred |
Cys709 |
Cys851 |
Cys986 |
Cys995 |
|||
Pos in isoform 6
CSS-Palm 4.0 PalmPred |
Cys721 |
Cys863 |
Cys998 |
Cys1007 |
Cys1021 |
Cys1032 |
Cys1186 |
Pos in isoform 7
CSS-Palm 4.0 PalmPred |
Cys709 |
Cys851 |
Cys986 |
Cys995 |
Cys1009 |
Cys1020 |
Cys1174 |
Pos in isoform 8
CSS-Palm 4.0 PalmPred |
Cys709 |
Cys851 |
Cys986 |
Cys995 |
Cys1009 |
Cys1020 |
Cys1210 |
Legend
Subcell. location | U Undefined E Extracellular/Lumenal T Transmembrane C Cytosolic/Nuclear |
Prediction confidence |
Cysteine position:
Predicted (high confidence prediction with CSS-Palm or/and PalmPred) and validated (in terms of disulfide bonds and cellular location) / Predicted but not validated (in terms of disulfide bond and cellular location) / Not predicted CSS-Palm 4.0: High confidence, Medium confidence, Low confidence, Not predicted. PalmPred: High confidence (score > 0.4), Medium confidence (0.1 < score < 0.4), Low confidence (score < 0.1), Not predicted. |
List of palmitoyl-proteomes
Summary table by organism
Tip: Keep CTRL key pressed down while clicking on column headers to do multiple sorting. This applies to any sortable table on this site.
ID of the experiment | Reference | Year | Organism | Cell type | Subcellular location | Technique(s) | Found? | In list | All lists |
---|---|---|---|---|---|---|---|---|---|
SPalmE:14 | Roth AF et al. | 2006 | Saccharomyces cerevisiae | Isogenic LRB759 | Total membrane | ABE | x | HC HC: 48 hits | |
SPalmE:13 | Kang R et al. | 2008 | Rattus norvegicus | Cortical neuron | Synaptosomal membrane | ABE | Ortholog | in LC [AT2B1] |
HC: 107 hits LC: 308 hits |
SPalmE:6 | Martin BR et al. | 2009 | Homo sapiens | Jurkat | Total membrane | Click chemistry | Found | in LC |
HC: 127 hits LC: 188 hits List: 0 hits |
SPalmE:1 | Yang W et al. | 2010 | Homo sapiens | DU145 | Total membrane | ABE | Found | in LC |
HC: 162 hits LC: 218 hits |
SPalmE:10 | Yount JS et al. | 2010 | Mus musculus | Dendritic cell | Total cell lysate | Click chemistry | x |
HC: 59 hits LC: 105 hits |
|
SPalmE:578 | Yang W et al. | 2010 | Homo sapiens | DU145 | Lipid raft | ABE | x |
HC: 102 hits LC: 73 hits |
|
SPalmE:577 | Yang W et al. | 2010 | Homo sapiens | DU145 | Non-lipid raft | ABE | Found | in LC |
HC: 63 hits LC: 147 hits |
SPalmE:12 | Martin BR et al. | 2011 | Mus musculus | BW5147-derived mouse T-cell hybridoma cell | Total membrane | Click chemistry | x |
HC HC: 352 hits LC LC: 8 hits |
|
SPalmE:2 | Dowal L et al. | 2011 | Homo sapiens | Platelet | Total membrane | ABE | x | List: 214 hits | |
SPalmE:8 | Merrick BA et al. | 2011 | Mus musculus | Macrophage Raw 264.7 | Total membrane | ABE | x | List: 69 hits | |
SPalmE:511 | Emmer BT et al. | 2011 | Trypanosoma brucei brucei | NA | Total cell lysate | ABE | x | List: 126 hits | |
SPalmE:5 | Forrester MT et al. | 2011 | Homo sapiens | HEK293 | Total membrane | ARAC | x | List: 69 hits | |
SPalmE:7 | Wilson JP et al. | 2011 | Homo sapiens | Jurkat | Total cell lysate | Click chemistry | x |
HC: 164 hits LC: 178 hits |
|
SPalmE:3 | Ivaldi C et al. | 2012 | Homo sapiens | B-cell | Total membrane | ABE | x | HC HC: 93 hits | |
SPalmE:580 | Jones ML et al. | 2012 | Plasmodium falciparum | Whole organism | Total cell lysate | Click chemistry, SILAC | x |
HC: 79 hits LC: 89 hits |
|
SPalmE:162 | Jones ML et al. | 2012 | Plasmodium falciparum | Whole organism | Total cell lysate | ABE | x |
HC: 100 hits LC: 217 hits |
|
SPalmE:11 | Li Y et al. | 2012 | Mus musculus | Neural stem cell | Total cell lysate | Click chemistry | x | HC HC: 254 hits | |
SPalmE:4 | Marin EP et al. | 2012 | Homo sapiens | Umbilical vein blood | NA | ABE | x | List: 154 hits | |
SPalmE:9 | Ren W et al. | 2013 | Mus musculus | 3T3-L1 and epididymal fat pads | Total membrane | ARAC | x | List: 664 hits | |
SPalmE:15 | Hemsley PA et al. | 2013 | Arabidopsis thaliana | Heyn Col-4 ecotype root cell suspension | Microsomal membrane | ABE | Ortholog | in HC,LC [ACA11, ACA8, ACA10, ACA1] |
HC: 122 hits MC: 94 hits LC: 366 hits |
SPalmE:119 | Wan J et al. | 2013 | Mus musculus | Brain | Total cell lysate | ABE | Ortholog | in List [AT2B1, AT2B2, AT2B4, Q0VF55, E9Q828] | List: 378 hits |
SPalmE:160 | Zhang MM et al. | 2013 | Schizosaccharomyces pombe | Whole organism | Total cell lysate | Click chemistry | x | List: 238 hits | |
SPalmE:507 | Chesarino NM et al. | 2014 | Mus musculus | DC2.4 | Total cell lysate | Click chemistry | x | List: 246 hits | |
SPalmE:508 | Chesarino NM et al. | 2014 | Mus musculus | MEF | Total cell lysate | Click chemistry | x | List: 436 hits | |
SPalmE:184 | Wei X et al. | 2014 | Homo sapiens | HUVEC | Total cell lysate | ABE | x |
Palm decreased: 40 hits Palm increased: 33 hits List: 367 hits |
|
SPalmE:619 | Peng T et al. | 2015 | Homo sapiens | HEK293 | Total cell lysate | Alk16 Labeling | x | List: 354 hits | |
SPalmE:504 | Serwa RA et al. | 2015 | Homo sapiens | RPE-1 | Total cell lysate | SILAC, 16-HDYA labeling | Found | in List | List: 1348 hits |
SPalmE:620 | Peng T et al. | 2015 | Homo sapiens | HEK293 | Total cell lysate | Photo cleavable x-alk16 labeling | x | List: 354 hits | |
SPalmE:506 | Morrison E et al. | 2015 | Homo sapiens | Jurkat | Total cell lysate | Click chemistry, SILAC | x | List: 226 hits | |
SPalmE:540 | Gould NS et al. | 2015 | Mus musculus | Liver | Total cell lysate | APE | x | List: 780 hits | |
SPalmE:529 | Colquhoun DR et al. | 2015 | Homo sapiens | 174 x CEM.T1 | Total cell lysate | Click-IT Palmitic Acid labeling | x | List: 113 hits | |
SPalmE:510 | Santiago-Tirado FH et al. | 2015 | Cryptococcus neoformans | NA | Total cell lysate | Click chemistry | x | List: 354 hits | |
SPalmE:509 | Santiago-Tirado FH et al. | 2015 | Cryptococcus neoformans | NA | Total cell lysate | Click chemistry | x | List: 426 hits | |
SPalmE:505 | Morrison E et al. | 2015 | Homo sapiens | Primary CD4 + T cells | Total cell lysate | ABE, In gel SILAC labeling | x | List: 274 hits | |
SPalmE:536 | Foe IT et al. | 2015 | Toxoplasma gondii | NA | Total membrane | Click chemistry | x |
HC: 210 hits MC: 72 hits |
|
SPalmE:902 | Caballero MC et al. | 2016 | Toxoplasma gondii | whole parasite lysates | NA | ABE | x | HC: 164 hits | |
SPalmE:829 | Upadhyay S et al. | 2016 | Aspergillus fumigatus | Conidia | NA | ABE | x | List: 133 hits | |
SPalmE:724 | Fang C et al. | 2016 | Homo sapiens | SW480 | NA | ARAC | x | List: 100 hits | |
SPalmE:909 | Thinon E et al. | 2016 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | Alk16 Labeling | x |
HC: 197 hits MC: 143 hits LC: 302 hits |
|
SPalmE:723 | Hernandez JL et al. | 2016 | Homo sapiens | MCF7 | Total cell lysate | Alk16 Labeling | Found | in List | List: 1353 hits |
SPalmE:698 | Pinner AL et al. | 2016 | Homo sapiens | Brain | Total cell lysate | ABE | Found | in List | List: 216 hits |
SPalmE:993 | Shen LF et al. | 2017 | Mus musculus | Liver | Total membrane | ARAC | x | ZDHHC13 substrates: 16 hits | |
SPalmE:903 | Collins MO et al. | 2017 | Mus musculus | Forebrain | NA | ABE | x | HC: 1079 hits | |
SPalmE:907 | Edmonds MJ et al. | 2017 | Rattus norvegicus | Brain | NA | ARAC | x | List: 95 hits | |
SPalmE:906 | Edmonds MJ et al. | 2017 | Rattus norvegicus | Brain | NA | ABE | x | List: 193 hits | |
SPalmE:855 | Shen LF et al. | 2017 | Mus musculus | Liver | Total membrane | ARAC | x | List: 865 hits | |
SPalmE:1183 | Thinon E et al. | 2018 | Homo sapiens | HeLa | Total cell lysate | NH2OH cleavage of thioester bond, Alk16 Labeling | x |
HC: 132 hits MC: 138 hits LC: 110 hits |
|
SPalmE:1184 | Thinon E et al. | 2018 | Homo sapiens | HeLa | Total cell lysate | ARAC | x |
HC: 545 hits MC: 415 hits LC: 219 hits |
|
SPalmE:1182 | Thinon E et al. | 2018 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | ARAC | x |
HC: 198 hits MC: 143 hits LC: 120 hits |
|
SPalmE:1186 | Thinon E et al. | 2018 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | NH2OH cleavage of thioester bond, Alk16 Labeling | x |
HC: 177 hits MC: 162 hits LC: 123 hits |
|
SPalmE:1181 | Thinon E et al. | 2018 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | NH2OH cleavage of thioester bond, Alk16 Labeling | x |
HC: 244 hits MC: 187 hits LC: 120 hits |
|
SPalmE:1191 | Won SJ et al. | 2018 | Homo sapiens | HEK293T | Total cell lysate | Click chemistry | x | List: 195 hits | |
SPalmE:1192 | Won SJ et al. | 2018 | Homo sapiens | HAP1 | Total cell lysate | Click chemistry | Found | in List | List: 984 hits |
SPalmE:1193 | Won SJ et al. | 2018 | Homo sapiens | HAP1 | Total cell lysate | ARAC | x | List: 1394 hits | |
SPalmE:1194 | Won SJ et al. | 2018 | Homo sapiens | HAP1 | Total cell lysate | ARAC, | x | List: 1404 hits | |
SPalmE:1203 | Zhang X et al. | 2018 | Mus musculus | Brain | Total membrane | Enrichment by magnetic nanoparticles | x |
HC: 917 hits MC: 352 hits LC: 15 hits |
|
SPalmE:1259 | Dumoulin A et al. | 2018 | Mus musculus | F11 | Total membrane | ABE, NH2OH cleavage of thioester bond, LC-MS | x |
HC: 1 hits MC: 10 hits LC: 4 hits |
|
SPalmE:1260 | Wang Z et al. | 2018 | Bos taurus | Lens fiber cell | Total cell lysate | ABE, NH2OH cleavage of thioester bond, LC-MS | x | List: 52 hits | |
SPalmE:920 | Sobocińska J et al. | 2018 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | Click chemistry | x | LPS treatment: 646 hits | |
SPalmE:919 | Sobocińska J et al. | 2018 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | Click chemistry | x | List: 646 hits | |
SPalmE:908 | Sobocińska J et al. | 2018 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | Click chemistry | x |
Palm. up with LPS: 156 hits Palm. down with LPS: 189 hits |
|
SPalmE:1185 | Thinon E et al. | 2018 | Homo sapiens | HeLa | Total cell lysate | NH2OH cleavage of thioester bond, LC-MS, Alk16 Labeling | x |
Chymotrypsin: 286 hits Trypsin: 1291 hits |
|
SPalmE:1187 | Thinon E et al. | 2018 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | ARAC | Ortholog | in LC [AT2B1, AT2B2, AT2B4, Q0VF55, E9Q828] |
HC: 281 hits MC: 139 hits LC: 113 hits |
SPalmE:1303 | Zaręba-Kozioł M et al. | 2019 | Mus musculus | Brain | Postsynaptic density fraction | ABE, NH2OH cleavage of thioester bond, LC-MS | x | ||
SPalmE:1270 | Strassburger K et al. | 2019 | Drosophila melanogaster | Circa 160 L2 larvae | Total cell lysate | ABE, NH2OH cleavage of thioester bond, PAT KO, MS | x | List: 13 hits | |
SPalmE:1266 | Strassburger K et al. | 2019 | Drosophila melanogaster | Circa 160 L2 larvae | Total cell lysate | ABE, NH2OH cleavage of thioester bond, PAT KO, MS | x | List: 157 hits | |
SPalmE:1265 | Wang J et al. | 2019 | Mus musculus | 3T3-L1 | Total membrane | MS, BioID | x | List: 9 hits | |
SPalmE:1333 | Zaręba-Kozioł M et al. | 2019 | Mus musculus | Brain | Postsynaptic density fraction | ABE, NH2OH cleavage of thioester bond, LC-MS | x | ||
SPalmE:1433 | Zhou B et al. | 2019 | Homo sapiens | LNCaP | Total cell lysate | NH2OH cleavage of thioester bond, LC-MS, LB-ABE, ABE | Found | in List | List: 2929 hits |
SPalmE:1432 | Zhou B et al. | 2019 | Homo sapiens | LNCaP | Total cell lysate | ABE, SILAC, NH2OH cleavage of thioester bond, LC-MS | x | List: 590 hits | |
SPalmE:1434 | Wegleiter T et al. | 2019 | Mus musculus | Neural stem cell | Total cell lysate | ABE, NH2OH cleavage of thioester bond, LC-MS | x | List: 370 hits | |
SPalmE:1438 | Mariscal J et al. | 2020 | Homo sapiens | PC3 | Total membrane | ARAC, NH2OH cleavage of thioester bond, LC-MS, LB-ABE | Found | in HC | HC: 1837 hits |
SPalmE:1439 | Mariscal J et al. | 2020 | Homo sapiens | PC3 | Large Extracellular Vesicles | ARAC, NH2OH cleavage of thioester bond, LC-MS, LB-ABE | Found | in HC | HC: 1350 hits |
SPalmE:1440 | Mariscal J et al. | 2020 | Homo sapiens | PC3 | Small Extracellular Vesicles | ARAC, NH2OH cleavage of thioester bond, LC-MS, LB-ABE | Found | in HC | HC: 600 hits |
SPalmE:1435 | Morrison E et al. | 2020 | Homo sapiens | Jurkat | Total cell lysate | ABE, NH2OH cleavage of thioester bond, LC-MS, SILAC | x | Unstimulated: 37 hits | |
SPalmE:1436 | Morrison E et al. | 2020 | Homo sapiens | Jurkat | Total cell lysate | ABE, NH2OH cleavage of thioester bond, LC-MS, SILAC | x | List: 185 hits | |
SPalmE:1458 | Morrison E et al. | 2020 | Homo sapiens | Jurkat | Total cell lysate | ABE, NH2OH cleavage of thioester bond, LC-MS, SILAC | x | Stimulated: 148 hits | |
SPalmE:1437 | Mariscal J et al. | 2020 | Homo sapiens | PC3 | Total cell lysate | ARAC, NH2OH cleavage of thioester bond, LC-MS, LB-ABE | x | HC: 1869 hits | |
SPalmE:1450 | Zaręba-Kozioł M et al. | 2021 | Mus musculus | Brain | Synaptoneurosomal fraction | ABE, NH2OH cleavage of thioester bond, LC-MS | Ortholog | in List [AT2B1, AT2B2, AT2B4, Q0VF55, E9Q828] | List: 1093 hits |
SPalmE:1444 | Miles MR et al. | 2021 | Homo sapiens | Heart | Total cell lysate | ARAC, NH2OH cleavage of thioester bond, LC-MS | x | List: 687 hits | |
SPalmE:1447 | Pradhan AJ et al. | 2021 | Homo sapiens | HT-29 | Total cell lysate | Labeling of substrate with C20 AlkFA (Alk-18), LC-MS | x | List: 1173 hits | |
SPalmE:1448 | Pradhan AJ et al. | 2021 | Homo sapiens | HT-29 | Total cell lysate | Labeling of substrate with C20 AlkFA (Alk-18), LC-MS | x | List: 770 hits | |
SPalmE:1449 | Ripamonti M et al. | 2021 | Mus musculus | NIH-3T3 | Total cell lysate | ARAC, NH2OH cleavage of thioester bond, LC-MS | x | List: 199 hits | |
SPalmE:1445 | Miles MR et al. | 2021 | Rattus norvegicus | Heart | Total cell lysate | ARAC, NH2OH cleavage of thioester bond, LC-MS | Ortholog | in List [AT2B1] | List: 399 hits |
SPalmE:1451 | Zaręba-Kozioł M et al. | 2021 | Mus musculus | Brain | Synaptoneurosomal fraction | ABE, NH2OH cleavage of thioester bond, LC-MS | Ortholog | in List [AT2B1, AT2B2, AT2B4, Q0VF55, E9Q828] | List: 1048 hits |
SPalmE:1452 | Zaręba-Kozioł M et al. | 2021 | Mus musculus | Brain | Synaptoneurosomal fraction | ABE, NH2OH cleavage of thioester bond, LC-MS | Ortholog | in List [AT2B1, AT2B2, AT2B4, Q0VF55, E9Q828] | List: 1112 hits |
SPalmE:1453 | Zaręba-Kozioł M et al. | 2021 | Mus musculus | Brain | Synaptoneurosomal fraction | ABE, NH2OH cleavage of thioester bond, LC-MS | Ortholog | in List [AT2B1, AT2B2, AT2B4, Q0VF55, E9Q828] | List: 1040 hits |
SPalmE:1455 | Ziemlińska E et al. | 2021 | Mus musculus | Liver | Total membrane | ABE, NH2OH cleavage of thioester bond, LC-MS | x |
HC: 850 hits MC: 303 hits LC: 21 hits |
|
SPalmE:1446 | Miles MR et al. | 2021 | Canis familiaris | Heart | Total cell lysate | ARAC, NH2OH cleavage of thioester bond, LC-MS | x | List: 464 hits | |
SPalmE:1454 | Ziemlińska E et al. | 2021 | Mus musculus | Liver | Total membrane | ABE, NH2OH cleavage of thioester bond, LC-MS | Ortholog | in HC [AT2B1, AT2B2, AT2B4, Q0VF55, E9Q828] |
HC: 675 hits MC: 360 hits LC: 27 hits |
SPalmE:1443 | Uzbekova S et al. | 2021 | Bos taurus | Bovine follicular cells | Total cell lysate | ABE, NH2OH cleavage of thioester bond, LC-MS | x | List: 80 hits | |
SPalmE:1456 | Gao J et al. | 2022 | Mus musculus | Testis | Total cell lysate | ABE, NH2OH cleavage of thioester bond, LC-MS | Ortholog | in HC [AT2B1, AT2B2, AT2B4, Q0VF55, E9Q828] | HC: 4107 hits |
SPalmE:1442 | Gorenberg EL et al. | 2022 | Mus musculus | Brain | Total cell lysate | ARAC, NH2OH cleavage of thioester bond, LC-MS | Ortholog | in List [AT2B1, AT2B2, AT2B4, Q0VF55, E9Q828] | List: 1597 hits |
SPalmE:1441 | Gorenberg EL et al. | 2022 | Mus musculus | Brain | Synaptic fraction | ARAC, NH2OH cleavage of thioester bond, LC-MS | Ortholog | in List [AT2B1, AT2B2, AT2B4, Q0VF55, E9Q828] | List: 1378 hits |
SPalmE:1457 | Gao J et al. | 2022 | Mus musculus | Testis | Total cell lysate | ABE, NH2OH cleavage of thioester bond, LC-MS | Ortholog | in HC [AT2B1, AT2B2, AT2B4, Q0VF55, E9Q828] | HC: 3870 hits |
Summary table by organism
Organism | Total number of palmitoyl-proteome articles | Total number of palmitoyl-proteomes | Number of palmitoyl-proteomes containing this protein or an ortholog | % of palmitoyl-proteomes containing this protein or an ortholog | Orthologs |
---|---|---|---|---|---|
S. cerevisiae S288c | 1 | 1 | 0 | 0.0 | NA |
R. norvegicus | 3 | 4 | 2 | 50.0 | AT2B1_RAT |
H. sapiens | 22 | 38 | 11 | 28.9 | NA |
M. musculus | 23 | 37 | 11 | 29.7 | AT2B1_MOUSE , AT2B2_MOUSE , AT2B4_MOUSE , Q0VF55_MOUSE , E9Q828_MOUSE |
T. brucei brucei | 1 | 1 | 0 | 0.0 | NA |
P. falciparum | 1 | 2 | 0 | 0.0 | NA |
A. thaliana | 1 | 1 | 1 | 100.0 | ACA11_ARATH , ACA8_ARATH , ACA10_ARATH , ACA1_ARATH |
S. pombe | 1 | 1 | 0 | 0.0 | NA |
C. neoformans var. grubii serotype A strain H99 | 1 | 2 | 0 | 0.0 | NA |
T. gondii | 2 | 2 | 0 | 0.0 | NA |
A. fumigatus | 1 | 1 | 0 | 0.0 | NA |
B. taurus | 2 | 2 | 0 | 0.0 | NA |
D. melanogaster | 1 | 2 | 0 | 0.0 | Q9V4C7_DROME , E6EK15_DROME , E6EK18_DROME , Q59DQ0_DROME , E6EK17_DROME |
C. familiaris | 1 | 1 | 0 | 0.0 | NA |