General info Cross-references Sequences Orthologs Ortholog sequences Predictions Palmitoyl-proteomes References
Palmitoyl-proteomes
1/1
article for arabidopsis thaliana
18 orthologs
18 orthologs
Validation experiments
0
experiment
7 orthologs
7 orthologs
Curated sites & Enzymes
0
site from validation experiments*
0 site from palmitoyl-proteomes*
No PAT known
No APT known
*In main isoform only
0 site from palmitoyl-proteomes*
No PAT known
No APT known
*In main isoform only
Predictions
Predicted
1
cysteine in main isoform
Protein names
Ras-related protein RABG1; AtRABG1; Ras-related protein Rab78; AtRab78
Subcellular location
Cell membrane (By similarity)
Isoforms & protein length
Isoform 1 (main): 204 aa
Known functions
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UniProt feature viewer
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UniProt AC | st. | UniProt ID | Orthology source | Organism | Gene names | Protein name | Palmitome articles | Times validated | Techniques | Sites | Predicted |
---|---|---|---|---|---|---|---|---|---|---|---|
F1MJQ1 | F1MJQ1_BOVIN | MetaPhors | B. taurus | RAB7A | Ras-related protein Rab-7a | 0/1 | 0 | 0 | 0 | Yes | |
M9PE35 | M9PE35_DROME | MetaPhors | D. melanogaster | Dmel_CG12015, CG12015, rabx6, rabX6, DmRabX6, Dmel\CG12015, RabX6 | RabX6, isoform B | 0/1 | 0 | 0 | 0 | No | |
Q9VS10 | Q9VS10_DROME | MetaPhors | D. melanogaster | Dmel_CG8641, CG8641, Q9VS10, CG8641-RA, Dmel\CG8641 | MIP08469p | 0/1 | 0 | 0 | 0 | Yes | |
O96692 | O96692_DROME | MetaPhors | D. melanogaster | Rap2L, Rap21, Rap2, O96692, l(2)SH2 0581, l(2)SH0581, Dmel\CG3204, Dm Rap21, Dmel_CG3204, CG3204, Rap2l | RE63021p | 1/1 | 0 | 2 | 0 | Yes | |
Q9VRY2 | Q9VRY2_DROME | MetaPhors | D. melanogaster | Dmel_CG8519, CG8519, Dmel\CG8519 | RE30129p | 0/1 | 0 | 0 | 0 | Yes | |
D3ZM99 | D3ZM99_RAT | MetaPhors | R. norvegicus | Rergl | RERG-like | 0/2 | 0 | 0 | 0 | No | |
Q5BJZ5 | Q5BJZ5_RAT | MetaPhors | R. norvegicus | rCG_57132, Rhoh | Ras homolog family member H | 0/2 | 0 | 0 | 0 | Yes | |
Q4KLY1 | Q4KLY1_RAT | MetaPhors | R. norvegicus | rCG_37288, Rem1 | GTP-binding protein | 0/2 | 0 | 0 | 0 | No | |
A6H634 | A6H634_MOUSE | MetaPhors | M. musculus | Gm266 | Gene model 266, | 0/17 | 0 | 0 | 0 | No | |
Q3T0F5 | RAB7A_BOVIN | MetaPhors | B. taurus | RAB7, RAB7A | Ras-related protein Rab-7a | 0/1 | 0 | 0 | 0 | Yes | |
O75628 | REM1_HUMAN | MetaPhors | H. sapiens | REM, GES, REM1 | GTP-binding protein REM 1 | 0/17 | 0 | 0 | 0 | No | |
Q15669 | RHOH_HUMAN | MetaPhors | H. sapiens | TTF, ARHH, RHOH | Rho-related GTP-binding protein RhoH | 0/17 | 0 | 0 | 0 | Yes | |
P51149 | RAB7A_HUMAN | MetaPhors | H. sapiens | RAB7, RAB7A | Ras-related protein Rab-7a | 5/17 | 4 | 3 | 2 | Yes | |
P01116 | RASK_HUMAN | MetaPhors | H. sapiens | RASK2, KRAS2, KRAS | GTPase KRas | 7/17 | 0 | 2 | 0 | No | |
P10301 | RRAS_HUMAN | MetaPhors | H. sapiens | RRAS | Ras-related protein R-Ras | 11/17 | 4 | 3 | 1 | Yes | |
Q96A58 | RERG_HUMAN | MetaPhors | H. sapiens | RERG | Ras-related and estrogen-regulated growth inhibitor | 0/17 | 0 | 0 | 0 | No | |
Q96D21 | RHES_HUMAN | MetaPhors | H. sapiens | TEM2, RASD2 | GTP-binding protein Rhes | 0/17 | 0 | 0 | 0 | Yes | |
Q96L33 | RHOV_HUMAN | MetaPhors | H. sapiens | WRCH2, ARHV, RHOV | Rho-related GTP-binding protein RhoV | 0/17 | 0 | 0 | 0 | Yes | |
Q6T310 | RSLBA_HUMAN | MetaPhors | H. sapiens | RASL11A | Ras-like protein family member 11A | 0/17 | 0 | 0 | 0 | No | |
P61225 | RAP2B_HUMAN | MetaPhors | H. sapiens | RAP2B | Ras-related protein Rap-2b | 14/17 | 3 | 3 | 2 | Yes | |
Q15382 | RHEB_HUMAN | MetaPhors | H. sapiens | RHEB2, RHEB | GTP-binding protein Rheb | 1/17 | 0 | 1 | 0 | No | |
P62070 | RRAS2_HUMAN | MetaPhors | H. sapiens | TC21, RRAS2 | Ras-related protein R-Ras2 | 11/17 | 0 | 3 | 0 | Yes | |
P10114 | RAP2A_HUMAN | MetaPhors | H. sapiens | RAP2A | Ras-related protein Rap-2a | 10/17 | 2 | 3 | 2 | Yes | |
Q9Y3L5 | RAP2C_HUMAN | MetaPhors | H. sapiens | RAP2C | Ras-related protein Rap-2c | 13/17 | 2 | 3 | 3 | Yes | |
Q9HDY0 | YPT71_SCHPO | MetaPhors | S. pombe | SPAPB1A10.10c, ypt71 | GTP-binding protein ypt71 | 0/1 | 0 | 0 | 0 | Yes | |
O94655 | YPT7_SCHPO | MetaPhors | S. pombe | SPBC405.04c, ypt7 | GTP-binding protein ypt7 | 0/1 | 0 | 0 | 0 | Yes | |
O76742 | O76742_DROME | MetaPhors | D. melanogaster | Dmel_CG5915, CG5915, rab7, Rab7, Rab7A, RAB7, Rab-r7, Rab-7, O76742, drab7, dRab7, Drab7, DRab7, DRAB7, DmRab7, Dmel\CG5915, Dm Rab7, AAF56218 | CG5915 protein | 0/1 | 0 | 0 | 0 | Yes | |
Q2MGM2 | Q2MGM2_DROME | MetaPhors | D. melanogaster | Dmel_CG3204, CG3204, Rap2l | Ras-associated protein 2-like, isoform B | 0/1 | 0 | 0 | 0 | No | |
Q9VH66 | Q9VH66_DROME | MetaPhors | D. melanogaster | Dmel_CG8500, CG8500, CG8500-RA, Dmel\CG8500, Q9VH66 | FI18258p1 | 0/1 | 0 | 0 | 0 | No | |
Q9Z1Y0 | RHOV_RAT | MetaPhors | R. norvegicus | Rhov | Rho-related GTP-binding protein RhoV | 0/2 | 1 | 0 | 1 | Yes | |
P09527 | RAB7A_RAT | MetaPhors | R. norvegicus | Rab7, Rab7a | Ras-related protein Rab-7a | 1/2 | 0 | 1 | 0 | Yes | |
D3Z8L7 | RRAS_RAT | MetaPhors | R. norvegicus | Rras | Ras-related protein R-Ras | 1/2 | 0 | 1 | 0 | No | |
P61227 | RAP2B_RAT | MetaPhors | R. norvegicus | Rap2b | Ras-related protein Rap-2b | 0/2 | 0 | 0 | 0 | Yes | |
P08644 | RASK_RAT | MetaPhors | R. norvegicus | Kras2, Kras | GTPase KRas | 1/2 | 0 | 1 | 0 | Yes | |
Q5BJU0 | Q5BJU0_RAT | MetaPhors | R. norvegicus | rCG_40097, Rras2 | RAS-related 2 | 0/2 | 0 | 0 | 0 | Yes | |
P63033 | RHES_RAT | MetaPhors | R. norvegicus | Rasd2 | GTP-binding protein Rhes | 0/2 | 0 | 0 | 0 | Yes | |
D3ZK56 | D3ZK56_RAT | MetaPhors | R. norvegicus | rCG_53223, Rap2c | RAP2C, member of RAS oncogene family | 0/2 | 0 | 0 | 0 | Yes | |
P61226 | RAP2B_MOUSE | MetaPhors | M. musculus | Rap2b | Ras-related protein Rap-2b | 10/17 | 0 | 2 | 0 | Yes | |
Q9D3G9 | RHOH_MOUSE | MetaPhors | M. musculus | Arhh, Rhoh | Rho-related GTP-binding protein RhoH | 0/17 | 0 | 0 | 0 | Yes | |
P32883 | RASK_MOUSE | MetaPhors | M. musculus | Kras2, Kras | GTPase KRas | 3/17 | 0 | 2 | 0 | Yes | |
P10833 | RRAS_MOUSE | MetaPhors | M. musculus | Rras | Ras-related protein R-Ras | 9/17 | 2 | 2 | 1 | No | |
O88667 | RAD_MOUSE | MetaPhors | M. musculus | Rrad | GTP-binding protein RAD | 0/17 | 0 | 0 | 0 | No | |
Q921J2 | RHEB_MOUSE | MetaPhors | M. musculus | Rheb | GTP-binding protein Rheb | 0/17 | 0 | 0 | 0 | No | |
Q8R367 | RERG_MOUSE | MetaPhors | M. musculus | Rerg | Ras-related and estrogen-regulated growth inhibitor | 0/17 | 0 | 0 | 0 | No | |
O35929 | REM1_MOUSE | MetaPhors | M. musculus | Rem, Rem1 | GTP-binding protein REM 1 | 0/17 | 0 | 0 | 0 | No | |
P51150 | RAB7A_MOUSE | MetaPhors | M. musculus | Rab7, Rab7a | Ras-related protein Rab-7a | 6/17 | 0 | 2 | 2 | Yes | |
P62071 | RRAS2_MOUSE | MetaPhors | M. musculus | Rras2 | Ras-related protein R-Ras2 | 8/17 | 0 | 2 | 0 | Yes | |
Q8VDU1 | RHOV_MOUSE | MetaPhors | M. musculus | Rhov | Rho-related GTP-binding protein RhoV | 0/17 | 0 | 0 | 0 | Yes | |
Q6IMB1 | RSLBA_MOUSE | MetaPhors | M. musculus | Rasl11a | Ras-like protein family member 11A | 0/17 | 0 | 0 | 0 | No | |
Q8BU31 | RAP2C_MOUSE | MetaPhors | M. musculus | Rap2c | Ras-related protein Rap-2c | 10/17 | 0 | 2 | 0 | Yes |
Pos in alignment | 48 | 80 | 81 | 143 | 202 | 204 |
---|---|---|---|---|---|---|
Subcell. location | U | U | U | U | U | U |
Disulfide | no | no | no | no | no | no |
PSIPRED v.4.02 prediction | strand | strand | strand | helix | coil | coil |
UniProt secondary structure | NA | NA | NA | NA | NA | NA |
Pos in isoform 1 [Main]
CSS-Palm 4.0 PalmPred |
Cys48 |
Cys80 HC |
Cys81 |
Cys143 |
Cys202 LC |
Cys204 MC |
Legend
Subcell. location | U Undefined E Extracellular/Lumenal T Transmembrane C Cytosolic/Nuclear |
Prediction confidence |
Cysteine position:
Predicted (high confidence prediction with CSS-Palm or/and PalmPred) and validated (in terms of disulfide bonds and cellular location) / Predicted but not validated (in terms of disulfide bond and cellular location) / Not predicted CSS-Palm 4.0: High confidence, Medium confidence, Low confidence, Not predicted. PalmPred: High confidence (score > 0.4), Medium confidence (0.1 < score < 0.4), Low confidence (score < 0.1), Not predicted. |
List of palmitoyl-proteomes
Summary table by organism
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ID of the experiment | Reference | Year | Organism | Cell type | Subcellular location | Technique(s) | Found? | In list | All lists |
---|---|---|---|---|---|---|---|---|---|
SPalmE:14 | Roth AF et al. | 2006 | Saccharomyces cerevisiae | Isogenic LRB759 | Total membrane | ABE | x | HC HC: 48 hits | |
SPalmE:13 | Kang R et al. | 2008 | Rattus norvegicus | Cortical neuron | Synaptosomal membrane | ABE | Ortholog | in LC,HC [RAB7A, RRAS, RASK] |
HC: 107 hits LC: 308 hits |
SPalmE:6 | Martin BR et al. | 2009 | Homo sapiens | Jurkat | Total membrane | Click chemistry | Ortholog | in HC [RAP2B, RAB7A, RRAS2, RAP2C, RAP2A, RRAS, RASK, RHEB] |
HC: 127 hits LC: 188 hits List: 0 hits |
SPalmE:10 | Yount JS et al. | 2010 | Mus musculus | Dendritic cell | Total cell lysate | Click chemistry | Ortholog | in HC [RAB7A, RAP2C, RAP2B, RRAS, RASK, RRAS2] |
HC: 59 hits LC: 105 hits |
SPalmE:577 | Yang W et al. | 2010 | Homo sapiens | DU145 | Non-lipid raft | ABE | Ortholog | in HC [RAP2B, RAB7A, RRAS2, RAP2C, RAP2A, RRAS, RASK, RHEB] |
HC: 63 hits LC: 147 hits |
SPalmE:578 | Yang W et al. | 2010 | Homo sapiens | DU145 | Lipid raft | ABE | Ortholog | in HC [RAP2B, RAB7A, RRAS2, RAP2C, RAP2A, RRAS, RASK, RHEB] |
HC: 102 hits LC: 73 hits |
SPalmE:1 | Yang W et al. | 2010 | Homo sapiens | DU145 | Total membrane | ABE | Ortholog | in HC [RAP2B, RAB7A, RRAS2, RAP2C, RAP2A, RRAS, RASK, RHEB] |
HC: 162 hits LC: 218 hits |
SPalmE:2 | Dowal L et al. | 2011 | Homo sapiens | Platelet | Total membrane | ABE | Ortholog | in List [RAP2B, RAB7A, RRAS2, RAP2C, RAP2A, RRAS, RASK, RHEB] | List: 214 hits |
SPalmE:5 | Forrester MT et al. | 2011 | Homo sapiens | HEK293 | Total membrane | ARAC | x | List: 69 hits | |
SPalmE:7 | Wilson JP et al. | 2011 | Homo sapiens | Jurkat | Total cell lysate | Click chemistry | Ortholog | in LC [RAP2B, RAB7A, RRAS2, RAP2C, RAP2A, RRAS, RASK, RHEB] |
HC: 164 hits LC: 178 hits |
SPalmE:8 | Merrick BA et al. | 2011 | Mus musculus | Macrophage Raw 264.7 | Total membrane | ABE | Ortholog | in List [RAB7A, RAP2C, RAP2B, RRAS, RASK, RRAS2] | List: 69 hits |
SPalmE:12 | Martin BR et al. | 2011 | Mus musculus | BW5147-derived mouse T-cell hybridoma cell | Total membrane | Click chemistry | Ortholog | in HC [RAB7A, RAP2C, RAP2B, RRAS, RASK, RRAS2] |
HC HC: 352 hits LC LC: 8 hits |
SPalmE:511 | Emmer BT et al. | 2011 | Trypanosoma brucei brucei | NA | Total cell lysate | ABE | x | List: 126 hits | |
SPalmE:3 | Ivaldi C et al. | 2012 | Homo sapiens | B-cell | Total membrane | ABE | Ortholog | in HC [RAP2B, RAB7A, RRAS2, RAP2C, RAP2A, RRAS, RASK, RHEB] | HC HC: 93 hits |
SPalmE:4 | Marin EP et al. | 2012 | Homo sapiens | Umbilical vein blood | NA | ABE | Ortholog | in List [RAP2B, RAB7A, RRAS2, RAP2C, RAP2A, RRAS, RASK, RHEB] | List: 154 hits |
SPalmE:11 | Li Y et al. | 2012 | Mus musculus | Neural stem cell | Total cell lysate | Click chemistry | Ortholog | in HC [RAB7A, RAP2C, RAP2B, RRAS, RASK, RRAS2] | HC HC: 254 hits |
SPalmE:162 | Jones ML et al. | 2012 | Plasmodium falciparum | Whole organism | Total cell lysate | ABE | x |
HC: 100 hits LC: 217 hits |
|
SPalmE:580 | Jones ML et al. | 2012 | Plasmodium falciparum | Whole organism | Total cell lysate | Click chemistry, SILAC | x |
HC: 79 hits LC: 89 hits |
|
SPalmE:15 | Hemsley PA et al. | 2013 | Arabidopsis thaliana | Heyn Col-4 ecotype root cell suspension | Microsomal membrane | ABE | Found | in LC |
HC: 122 hits MC: 94 hits LC: 366 hits |
SPalmE:119 | Wan J et al. | 2013 | Mus musculus | Brain | Total cell lysate | ABE | Ortholog | in List [RAB7A, RAP2C, RAP2B, RRAS, RASK, RRAS2] | List: 378 hits |
SPalmE:160 | Zhang MM et al. | 2013 | Schizosaccharomyces pombe | Whole organism | Total cell lysate | Click chemistry | x | List: 238 hits | |
SPalmE:9 | Ren W et al. | 2013 | Mus musculus | 3T3-L1 and epididymal fat pads | Total membrane | ARAC | Ortholog | in List [RAB7A, RAP2C, RAP2B, RRAS, RASK, RRAS2] | List: 664 hits |
SPalmE:184 | Wei X et al. | 2014 | Homo sapiens | HUVEC | Total cell lysate | ABE | Ortholog | in List [RAP2B, RAB7A, RRAS2, RAP2C, RAP2A, RRAS, RASK, RHEB] |
Palm decreased: 40 hits Palm increased: 33 hits List: 367 hits |
SPalmE:507 | Chesarino NM et al. | 2014 | Mus musculus | DC2.4 | Total cell lysate | Click chemistry | Ortholog | in List [RAB7A, RAP2C, RAP2B, RRAS, RASK, RRAS2] | List: 246 hits |
SPalmE:508 | Chesarino NM et al. | 2014 | Mus musculus | MEF | Total cell lysate | Click chemistry | Ortholog | in List [RAB7A, RAP2C, RAP2B, RRAS, RASK, RRAS2] | List: 436 hits |
SPalmE:504 | Serwa RA et al. | 2015 | Homo sapiens | RPE-1 | Total cell lysate | SILAC, 16-HDYA labeling | Ortholog | in List [RAP2B, RAB7A, RRAS2, RAP2C, RAP2A, RRAS, RASK, RHEB] | List: 1348 hits |
SPalmE:505 | Morrison E et al. | 2015 | Homo sapiens | Primary CD4 + T cells | Total cell lysate | ABE, In gel SILAC labeling | Ortholog | in List [RAP2B, RAB7A, RRAS2, RAP2C, RAP2A, RRAS, RASK, RHEB] | List: 274 hits |
SPalmE:506 | Morrison E et al. | 2015 | Homo sapiens | Jurkat | Total cell lysate | Click chemistry, SILAC | Ortholog | in List [RAP2B, RAB7A, RRAS2, RAP2C, RAP2A, RRAS, RASK, RHEB] | List: 226 hits |
SPalmE:509 | Santiago-Tirado FH et al. | 2015 | Cryptococcus neoformans | NA | Total cell lysate | Click chemistry | x | List: 426 hits | |
SPalmE:510 | Santiago-Tirado FH et al. | 2015 | Cryptococcus neoformans | NA | Total cell lysate | Click chemistry | x | List: 354 hits | |
SPalmE:529 | Colquhoun DR et al. | 2015 | Homo sapiens | 174 x CEM.T1 | Total cell lysate | Click-IT Palmitic Acid labeling | Ortholog | in List [RAP2B, RAB7A, RRAS2, RAP2C, RAP2A, RRAS, RASK, RHEB] | List: 113 hits |
SPalmE:536 | Foe IT et al. | 2015 | Toxoplasma gondii | NA | Total membrane | Click chemistry | x |
HC: 210 hits MC: 72 hits |
|
SPalmE:540 | Gould NS et al. | 2015 | Mus musculus | Liver | Total cell lysate | APE | x | List: 780 hits | |
SPalmE:619 | Peng T et al. | 2015 | Homo sapiens | HEK293 | Total cell lysate | Alk16 Labeling | Ortholog | in List [RAP2B, RAB7A, RRAS2, RAP2C, RAP2A, RRAS, RASK, RHEB] | List: 354 hits |
SPalmE:620 | Peng T et al. | 2015 | Homo sapiens | HEK293 | Total cell lysate | Photo cleavable x-alk16 labeling | Ortholog | in List [RAP2B, RAB7A, RRAS2, RAP2C, RAP2A, RRAS, RASK, RHEB] | List: 354 hits |
SPalmE:698 | Pinner AL et al. | 2016 | Homo sapiens | Brain | Total cell lysate | ABE | Ortholog | in List [RAP2B, RAB7A, RRAS2, RAP2C, RAP2A, RRAS, RASK, RHEB] | List: 216 hits |
SPalmE:723 | Hernandez JL et al. | 2016 | Homo sapiens | MCF7 | Total cell lysate | Alk16 Labeling | Ortholog | in List [RAP2B, RAB7A, RRAS2, RAP2C, RAP2A, RRAS, RASK, RHEB] | List: 1353 hits |
SPalmE:724 | Fang C et al. | 2016 | Homo sapiens | SW480 | NA | ARAC | x | List: 100 hits | |
SPalmE:829 | Upadhyay S et al. | 2016 | Aspergillus fumigatus | Conidia | NA | ABE | x | List: 133 hits | |
SPalmE:902 | Caballero MC et al. | 2016 | Toxoplasma gondii | whole parasite lysates | NA | ABE | x | HC: 164 hits | |
SPalmE:909 | Thinon E et al. | 2016 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | Alk16 Labeling | Ortholog | in MC,LC,HC [RAB7A, RAP2C, RAP2B, RRAS, RASK, RRAS2] |
HC: 197 hits MC: 143 hits LC: 302 hits |
SPalmE:903 | Collins MO et al. | 2017 | Mus musculus | Forebrain | NA | ABE | Ortholog | in HC [RAB7A, RAP2C, RAP2B, RRAS, RASK, RRAS2] | HC: 1079 hits |
SPalmE:906 | Edmonds MJ et al. | 2017 | Rattus norvegicus | Brain | NA | ABE | Ortholog | in List [RAB7A, RRAS, RASK] | List: 193 hits |
SPalmE:907 | Edmonds MJ et al. | 2017 | Rattus norvegicus | Brain | NA | ARAC | x | List: 95 hits | |
SPalmE:855 | Shen LF et al. | 2017 | Mus musculus | Liver | Total membrane | ARAC | Ortholog | in List [RAB7A, RAP2C, RAP2B, RRAS, RASK, RRAS2] | List: 865 hits |
SPalmE:993 | Shen LF et al. | 2017 | Mus musculus | Liver | Total membrane | ARAC | x | ZDHHC13 substrates: 16 hits | |
SPalmE:1187 | Thinon E et al. | 2018 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | ARAC | Ortholog | in HC,MC [RAB7A, RAP2C, RAP2B, RRAS, RASK, RRAS2] |
HC: 281 hits MC: 139 hits LC: 113 hits |
SPalmE:908 | Sobocińska J et al. | 2018 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | Click chemistry | Ortholog | in Palm. up with LPS [RAB7A, RAP2C, RAP2B, RRAS, RASK, RRAS2] |
Palm. up with LPS: 156 hits Palm. down with LPS: 189 hits |
SPalmE:919 | Sobocińska J et al. | 2018 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | Click chemistry | Ortholog | in List [RAB7A, RAP2C, RAP2B, RRAS, RASK, RRAS2] | List: 646 hits |
SPalmE:920 | Sobocińska J et al. | 2018 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | Click chemistry | Ortholog | in LPS treatment [RAB7A, RAP2C, RAP2B, RRAS, RASK, RRAS2] | LPS treatment: 646 hits |
SPalmE:1183 | Thinon E et al. | 2018 | Homo sapiens | HeLa | Total cell lysate | NH2OH cleavage of thioester bond, Alk16 Labeling | Ortholog | in MC,LC,HC [RAP2B, RAB7A, RRAS2, RAP2C, RAP2A, RRAS, RASK, RHEB] |
HC: 132 hits MC: 138 hits LC: 110 hits |
SPalmE:1182 | Thinon E et al. | 2018 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | ARAC | Ortholog | in HC [RAB7A, RAP2C, RAP2B, RRAS, RASK, RRAS2] |
HC: 198 hits MC: 143 hits LC: 120 hits |
SPalmE:1192 | Won SJ et al. | 2018 | Homo sapiens | HAP1 | Total cell lysate | Click chemistry | Ortholog | in List [RAP2B, RAB7A, RRAS2, RAP2C, RAP2A, RRAS, RASK, RHEB] | List: 984 hits |
SPalmE:1194 | Won SJ et al. | 2018 | Homo sapiens | HAP1 | Total cell lysate | ARAC, | Ortholog | in List [RAP2B, RAB7A, RRAS2, RAP2C, RAP2A, RRAS, RASK, RHEB] | List: 1404 hits |
SPalmE:1193 | Won SJ et al. | 2018 | Homo sapiens | HAP1 | Total cell lysate | ARAC | Ortholog | in List [RAP2B, RAB7A, RRAS2, RAP2C, RAP2A, RRAS, RASK, RHEB] | List: 1394 hits |
SPalmE:1203 | Zhang X et al. | 2018 | Mus musculus | Brain | Total membrane | Enrichment by magnetic nanoparticles | Ortholog | in HC,LC [RAB7A, RAP2C, RAP2B, RRAS, RASK, RRAS2] |
HC: 917 hits MC: 352 hits LC: 15 hits |
SPalmE:1184 | Thinon E et al. | 2018 | Homo sapiens | HeLa | Total cell lysate | ARAC | Ortholog | in MC,HC [RAP2B, RAB7A, RRAS2, RAP2C, RAP2A, RRAS, RASK, RHEB] |
HC: 545 hits MC: 415 hits LC: 219 hits |
SPalmE:1185 | Thinon E et al. | 2018 | Homo sapiens | HeLa | Total cell lysate | NH2OH cleavage of thioester bond, LC-MS, Alk16 Labeling | x |
Chymotrypsin: 286 hits Trypsin: 1291 hits |
|
SPalmE:1191 | Won SJ et al. | 2018 | Homo sapiens | HEK293T | Total cell lysate | Click chemistry | Ortholog | in List [RAP2B, RAB7A, RRAS2, RAP2C, RAP2A, RRAS, RASK, RHEB] | List: 195 hits |
SPalmE:1181 | Thinon E et al. | 2018 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | NH2OH cleavage of thioester bond, Alk16 Labeling | Ortholog | in HC,MC [RAB7A, RAP2C, RAP2B, RRAS, RASK, RRAS2] |
HC: 244 hits MC: 187 hits LC: 120 hits |
SPalmE:1186 | Thinon E et al. | 2018 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | NH2OH cleavage of thioester bond, Alk16 Labeling | Ortholog | in LC,MC,HC [RAB7A, RAP2C, RAP2B, RRAS, RASK, RRAS2] |
HC: 177 hits MC: 162 hits LC: 123 hits |
SPalmE:1260 | Wang Z et al. | 2018 | Bos taurus | Lens fiber cell | Total cell lysate | ABE, NH2OH cleavage of thioester bond, LC-MS | x | List: 52 hits | |
SPalmE:1259 | Dumoulin A et al. | 2018 | Mus musculus | F11 | Total membrane | ABE, NH2OH cleavage of thioester bond, LC-MS | x |
HC: 1 hits MC: 10 hits LC: 4 hits |
|
SPalmE:1303 | Zaręba-Kozioł M et al. | 2019 | Mus musculus | Brain | Postsynaptic density fraction | ABE, NH2OH cleavage of thioester bond, LC-MS | x | ||
SPalmE:1333 | Zaręba-Kozioł M et al. | 2019 | Mus musculus | Brain | Postsynaptic density fraction | ABE, NH2OH cleavage of thioester bond, LC-MS | x | ||
SPalmE:1270 | Strassburger K et al. | 2019 | Drosophila melanogaster | Circa 160 L2 larvae | Total cell lysate | ABE, NH2OH cleavage of thioester bond, PAT KO, MS | x | List: 13 hits | |
SPalmE:1266 | Strassburger K et al. | 2019 | Drosophila melanogaster | Circa 160 L2 larvae | Total cell lysate | ABE, NH2OH cleavage of thioester bond, PAT KO, MS | Ortholog | in List [O96692, Q2MGM2] | List: 157 hits |
SPalmE:1265 | Wang J et al. | 2019 | Mus musculus | 3T3-L1 | Total membrane | MS, BioID | x | List: 9 hits |
Summary table by organism
Organism | Total number of palmitoyl-proteome articles | Total number of palmitoyl-proteomes | Number of palmitoyl-proteomes containing this protein or an ortholog | % of palmitoyl-proteomes containing this protein or an ortholog | Orthologs |
---|---|---|---|---|---|
S. cerevisiae S288c | 1 | 1 | 0 | 0.0 | NA |
R. norvegicus | 2 | 3 | 2 | 66.7 | RAB7A_RAT , RRAS_RAT , RASK_RAT |
H. sapiens | 17 | 26 | 23 | 88.5 | RAP2B_HUMAN , RAB7A_HUMAN , RRAS2_HUMAN , RAP2C_HUMAN , RAP2A_HUMAN , RRAS_HUMAN , RASK_HUMAN , RHEB_HUMAN |
M. musculus | 17 | 25 | 19 | 76.0 | RAB7A_MOUSE , RAP2C_MOUSE , RAP2B_MOUSE , RRAS_MOUSE , RASK_MOUSE , RRAS2_MOUSE |
T. brucei brucei | 1 | 1 | 0 | 0.0 | NA |
P. falciparum | 1 | 2 | 0 | 0.0 | NA |
A. thaliana | 1 | 1 | 1 | 100.0 | NA |
S. pombe | 1 | 1 | 0 | 0.0 | NA |
C. neoformans var. grubii serotype A strain H99 | 1 | 2 | 0 | 0.0 | NA |
T. gondii | 2 | 2 | 0 | 0.0 | NA |
A. fumigatus | 1 | 1 | 0 | 0.0 | NA |
B. taurus | 1 | 1 | 0 | 0.0 | NA |
D. melanogaster | 1 | 2 | 1 | 50.0 | O96692_DROME , Q2MGM2_DROME |