General info Cross-references Sequences Orthologs Ortholog sequences Predictions Palmitoyl-proteomes References
Palmitoyl-proteomes
1/1
article for arabidopsis thaliana
16 orthologs
16 orthologs
Validation experiments
0
experiment
0 ortholog
0 ortholog
Curated sites & Enzymes
0
site from validation experiments*
0 site from palmitoyl-proteomes*
No PAT known
No APT known
*In main isoform only
0 site from palmitoyl-proteomes*
No PAT known
No APT known
*In main isoform only
Predictions
Predicted
1
cysteine in main isoform
Protein names
Probable inactive receptor kinase At3g02880
Subcellular location
Membrane (By similarity)
Isoforms & protein length
Isoform 1 (main): 627 aa
Known functions
Source | Identifiers |
---|---|
UniProt gene names | At3g02880, F13E7.17 |
Refseq protein ID | NP_186938.1 |
IPI ID | IPI00520008 |
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UniProt AC | st. | UniProt ID | Orthology source | Organism | Gene names | Protein name | Palmitome articles | Times validated | Techniques | Sites | Predicted |
---|---|---|---|---|---|---|---|---|---|---|---|
Q1RMT8 | IRAK4_BOVIN | MetaPhors | B. taurus | IRAK4 | Interleukin-1 receptor-associated kinase 4, IRAK-4, EC 2.7.11.1 | 0/2 | 0 | 0 | 0 | No | |
Q9NWZ3 | IRAK4_HUMAN | MetaPhors | H. sapiens | IRAK4 | Interleukin-1 receptor-associated kinase 4, IRAK-4, EC 2.7.11.1 | 0/22 | 0 | 0 | 0 | Yes | |
P14616 | INSRR_HUMAN | MetaPhors | H. sapiens | INSRR, IRR | Insulin receptor-related protein, IRR, EC 2.7.10.1 | 0/22 | 0 | 0 | 0 | Yes | |
A4D1F6 | LRRD1_HUMAN | MetaPhors | H. sapiens | LRRD1 | Leucine-rich repeat and death domain-containing protein 1 | 0/22 | 0 | 0 | 0 | Yes | |
P08069 | IGF1R_HUMAN | MetaPhors | H. sapiens | IGF1R | Insulin-like growth factor 1 receptor, EC 2.7.10.1 | 1/22 | 0 | 2 | 0 | Yes | |
Q05652 | KPEL_DROME | MetaPhors | D. melanogaster | pll, CG5974 | Serine/threonine-protein kinase pelle, EC 2.7.11.1 | 0/1 | 0 | 0 | 0 | Yes | |
P24062 | IGF1R_RAT | MetaPhors | R. norvegicus | Igf1r | Insulin-like growth factor 1 receptor, EC 2.7.10.1 | 0/3 | 0 | 0 | 0 | Yes | |
Q62799 | ERBB3_RAT | MetaPhors | R. norvegicus | Erbb3 | Receptor tyrosine-protein kinase erbB-3, EC 2.7.10.1 | 0/3 | 0 | 0 | 0 | Yes | |
Q64729 | TGFR1_MOUSE | MetaPhors | M. musculus | Tgfbr1 | TGF-beta receptor type-1, TGFR-1, EC 2.7.11.30 | 0/23 | 0 | 0 | 0 | Yes | |
Q60751 | IGF1R_MOUSE | MetaPhors | M. musculus | Igf1r | Insulin-like growth factor 1 receptor, EC 2.7.10.1 | 0/23 | 0 | 0 | 0 | Yes | |
Q9WTL4 | INSRR_MOUSE | MetaPhors | M. musculus | Insrr, Irr | Insulin receptor-related protein, IRR, EC 2.7.10.1 | 0/23 | 0 | 0 | 0 | Yes | |
Q8R4K2 | IRAK4_MOUSE | MetaPhors | M. musculus | Irak4 | Interleukin-1 receptor-associated kinase 4, IRAK-4, EC 2.7.11.1 | 0/23 | 0 | 0 | 0 | No | |
E9Q3S4 | M3K19_MOUSE | MetaPhors | M. musculus | Map3k19, Ysk4 | Mitogen-activated protein kinase kinase kinase 19, EC 2.7.11.1 | 1/23 | 0 | 2 | 0 | Yes | |
B2RYC8 | B2RYC8_RAT | MetaPhors | R. norvegicus | Irak3, Irak3_predicted, rCG_49175 | Interleukin-1 receptor-associated kinase 3 | 0/3 | 0 | 0 | 0 | Yes | |
D4A7K4 | D4A7K4_RAT | MetaPhors | R. norvegicus | Irak4 | Interleukin-1 receptor-associated kinase 4 | 0/3 | 0 | 0 | 0 | Yes | |
D4AD14 | D4AD14_RAT | MetaPhors | R. norvegicus | Lrrd1 | Leucine-rich repeats and death domain-containing 1 | 0/3 | 0 | 0 | 0 | No | |
A1Z7Y7 | A1Z7Y7_DROME | MetaPhors | D. melanogaster | CG1776, CG30004, Dmel\CG42347, FBgn0259678, sqa, CG42347, Dmel_CG42347 | Spaghetti-squash activator, isoform C | 0/1 | 0 | 0 | 0 | Yes | |
E1BPT0 | E1BPT0_BOVIN | MetaPhors | B. taurus | LRRD1 | Leucine rich repeats and death domain containing 1 | 0/2 | 0 | 0 | 0 | Yes | |
F1MC23 | F1MC23_BOVIN | MetaPhors | B. taurus | INSRR | Tyrosine-protein kinase receptor | 0/2 | 0 | 0 | 0 | Yes | |
O14965 | AURKA_HUMAN | MetaPhors | H. sapiens | AURKA, AIK, AIRK1, ARK1, AURA, AYK1, BTAK, IAK1, STK15, STK6 | Aurora kinase A, EC 2.7.11.1 | 0/22 | 0 | 0 | 0 | Yes | |
Q63184 | E2AK2_RAT | MetaPhors | R. norvegicus | Eif2ak2, Prkr | Interferon-induced, double-stranded RNA-activated protein kinase, EC 2.7.11.1 | 0/3 | 0 | 0 | 0 | No | |
B3FXL5 | B3FXL5_BOVIN | MetaPhors | B. taurus | IRAK3, IrakM | Interleukin 1 receptor associated kinase 3 | 0/2 | 0 | 0 | 0 | No | |
P54756 | EPHA5_HUMAN | InParanoid | H. sapiens | EPHA5, BSK, EHK1, HEK7, TYRO4 | Ephrin type-A receptor 5, EC 2.7.10.1 | 1/22 | 0 | 2 | 0 | Yes | |
P54764 | EPHA4_HUMAN | InParanoid | H. sapiens | EPHA4, HEK8, SEK, TYRO1 | Ephrin type-A receptor 4, EC 2.7.10.1 | 0/22 | 0 | 0 | 0 | Yes | |
P29322 | EPHA8_HUMAN | InParanoid | H. sapiens | EPHA8, EEK, HEK3, KIAA1459 | Ephrin type-A receptor 8, EC 2.7.10.1 | 0/22 | 0 | 0 | 0 | Yes | |
P29320 | EPHA3_HUMAN | InParanoid | H. sapiens | EPHA3, ETK, ETK1, HEK, TYRO4 | Ephrin type-A receptor 3, EC 2.7.10.1 | 1/22 | 0 | 2 | 0 | Yes | |
Q15375 | EPHA7_HUMAN | InParanoid | H. sapiens | EPHA7, EHK3, HEK11 | Ephrin type-A receptor 7, EC 2.7.10.1 | 3/22 | 0 | 3 | 0 | Yes | |
Q9UF33 | EPHA6_HUMAN | InParanoid | H. sapiens | EPHA6, EHK2, HEK12 | Ephrin type-A receptor 6, EC 2.7.10.1 | 1/22 | 0 | 2 | 0 | Yes | |
P29323 | EPHB2_HUMAN | InParanoid | H. sapiens | EPHB2, DRT, EPHT3, EPTH3, ERK, HEK5, TYRO5 | Ephrin type-B receptor 2, EC 2.7.10.1 | 4/22 | 0 | 3 | 0 | Yes | |
P54762 | EPHB1_HUMAN | InParanoid | H. sapiens | EPHB1, ELK, EPHT2, HEK6, NET | Ephrin type-B receptor 1, EC 2.7.10.1 | 1/22 | 0 | 2 | 0 | Yes | |
P54753 | EPHB3_HUMAN | InParanoid | H. sapiens | EPHB3, ETK2, HEK2, TYRO6 | Ephrin type-B receptor 3, EC 2.7.10.1 | 3/22 | 0 | 3 | 0 | Yes | |
P29317 | EPHA2_HUMAN | InParanoid | H. sapiens | EPHA2, ECK | Ephrin type-A receptor 2, EC 2.7.10.1 | 3/22 | 0 | 3 | 0 | Yes | |
P54760 | EPHB4_HUMAN | InParanoid | H. sapiens | EPHB4, HTK, MYK1, TYRO11 | Ephrin type-B receptor 4, EC 2.7.10.1 | 4/22 | 0 | 3 | 0 | Yes | |
Q5JZY3 | EPHAA_HUMAN | InParanoid | H. sapiens | EPHA10 | Ephrin type-A receptor 10, EC 2.7.10.1 | 0/22 | 0 | 0 | 0 | Yes | |
P21709 | EPHA1_HUMAN | InParanoid | H. sapiens | EPHA1, EPH, EPHT, EPHT1 | Ephrin type-A receptor 1, hEpha1, EC 2.7.10.1 | 1/22 | 0 | 2 | 0 | Yes | |
O15197 | EPHB6_HUMAN | InParanoid | H. sapiens | EPHB6 | Ephrin type-B receptor 6 | 0/22 | 0 | 0 | 0 | Yes | |
Q02763 | TIE2_HUMAN | InParanoid | H. sapiens | TEK, TIE2, VMCM, VMCM1 | Angiopoietin-1 receptor, EC 2.7.10.1 | 0/22 | 0 | 0 | 0 | Yes | |
P09581 | CSF1R_MOUSE | InParanoid | M. musculus | Csf1r, Csfmr, Fms | Macrophage colony-stimulating factor 1 receptor | 0/23 | 0 | 0 | 0 | Yes | |
Q61851 | FGFR3_MOUSE | InParanoid | M. musculus | Fgfr3, Mfr3, Sam3 | Fibroblast growth factor receptor 3, FGFR-3, EC 2.7.10.1 | 0/23 | 0 | 0 | 0 | Yes | |
P21803 | FGFR2_MOUSE | InParanoid | M. musculus | Fgfr2, Bek, Ect1 | Fibroblast growth factor receptor 2, FGFR-2, EC 2.7.10.1 | 0/23 | 0 | 0 | 0 | Yes | |
P16092 | FGFR1_MOUSE | InParanoid | M. musculus | Fgfr1, Flg | Fibroblast growth factor receptor 1, FGFR-1, bFGF-R-1, EC 2.7.10.1 | 0/23 | 0 | 0 | 0 | Yes | |
Q03142 | FGFR4_MOUSE | InParanoid | M. musculus | Fgfr4, Fgfr-4, Mpk-11 | Fibroblast growth factor receptor 4, FGFR-4, EC 2.7.10.1 | 0/23 | 0 | 0 | 0 | Yes | |
P05622 | PGFRB_MOUSE | InParanoid | M. musculus | Pdgfrb, Pdgfr, Pdgfr1 | Platelet-derived growth factor receptor beta, PDGF-R-beta, PDGFR-beta, EC 2.7.10.1 | 0/23 | 0 | 0 | 0 | No | |
Q00342 | FLT3_MOUSE | InParanoid | M. musculus | Flt3, Flk-2, Flt-3 | Receptor-type tyrosine-protein kinase FLT3, EC 2.7.10.1 | 1/23 | 0 | 2 | 0 | Yes | |
Q61006 | MUSK_MOUSE | InParanoid | M. musculus | Musk, Nsk2 | Muscle, skeletal receptor tyrosine-protein kinase, EC 2.7.10.1 | 0/23 | 0 | 0 | 0 | Yes | |
P55144 | TYRO3_MOUSE | InParanoid | M. musculus | Tyro3, Dtk, Rse, Tif | Tyrosine-protein kinase receptor TYRO3, EC 2.7.10.1 | 1/23 | 0 | 2 | 0 | Yes | |
Q00993 | UFO_MOUSE | InParanoid | M. musculus | Axl, Ark, Ufo | Tyrosine-protein kinase receptor UFO, EC 2.7.10.1 | 1/23 | 0 | 2 | 0 | Yes | |
Q8BKG3 | PTK7_MOUSE | InParanoid | M. musculus | Ptk7 | Inactive tyrosine-protein kinase 7 | 2/23 | 0 | 3 | 0 | Yes | |
Q60805 | MERTK_MOUSE | InParanoid | M. musculus | Mertk, Mer | Tyrosine-protein kinase Mer, EC 2.7.10.1 | 0/23 | 0 | 0 | 0 | Yes | |
Q3UFB7 | NTRK1_MOUSE | InParanoid | M. musculus | Ntrk1 | High affinity nerve growth factor receptor, EC 2.7.10.1 | 0/23 | 0 | 0 | 0 | Yes | |
F1PYP5 | F1PYP5_CANLF | InParanoid | C. familiaris | NTRK3 | Tyrosine-protein kinase receptor | 0/1 | 0 | 0 | 0 | Yes | |
E2RKA1 | E2RKA1_CANLF | InParanoid | C. familiaris | NTRK2 | Tyrosine-protein kinase receptor | 0/1 | 0 | 0 | 0 | Yes | |
P35739 | NTRK1_RAT | InParanoid | R. norvegicus | Ntrk1, Trk, Trka | High affinity nerve growth factor receptor, EC 2.7.10.1 | 0/3 | 0 | 0 | 0 | Yes | |
Q03351 | NTRK3_RAT | InParanoid | R. norvegicus | Ntrk3, Trkc | NT-3 growth factor receptor, EC 2.7.10.1 | 0/3 | 0 | 0 | 0 | Yes | |
Q63604 | NTRK2_RAT | InParanoid | R. norvegicus | Ntrk2, Trkb | BDNF/NT-3 growth factors receptor, EC 2.7.10.1 | 0/3 | 0 | 0 | 0 | Yes | |
P11792 | SCH9_YEAST | InParanoid | S. cerevisiae S288c | SCH9, KOM1, YHR205W | Serine/threonine-protein kinase SCH9, EC 2.7.11.1 | 0/1 | 0 | 0 | 0 | Yes | |
P18961 | YPK2_YEAST | InParanoid | S. cerevisiae S288c | YPK2, YKR2, YMR104C, YM9718.03C | Serine/threonine-protein kinase YPK2/YKR2, EC 2.7.11.1 | 0/1 | 0 | 0 | 0 | No | |
P12688 | YPK1_YEAST | InParanoid | S. cerevisiae S288c | YPK1, SLI2, YKL126W | Serine/threonine-protein kinase YPK1, EC 2.7.11.1 | 0/1 | 0 | 0 | 0 | No |
Pos in alignment | 55 | 62 | 217 | 224 | 261 | 274 | 276 | 594 |
---|---|---|---|---|---|---|---|---|
Subcell. location | U | U | U | U | T | U | U | U |
Disulfide | no | no | no | no | no | no | no | no |
PSIPRED v.4.02 prediction | coil | strand | coil | coil | helix | helix | helix | helix |
UniProt secondary structure | NA | NA | NA | NA | NA | NA | NA | NA |
Pos in isoform 1 [Main]
CSS-Palm 4.0 PalmPred |
Cys55 |
Cys62 |
Cys217 |
Cys224 |
Cys261 LC |
Cys274 MC |
Cys276 MC HC |
Cys594 |
Legend
Subcell. location | U Undefined E Extracellular/Lumenal T Transmembrane C Cytosolic/Nuclear |
Prediction confidence |
Cysteine position:
Predicted (high confidence prediction with CSS-Palm or/and PalmPred) and validated (in terms of disulfide bonds and cellular location) / Predicted but not validated (in terms of disulfide bond and cellular location) / Not predicted CSS-Palm 4.0: High confidence, Medium confidence, Low confidence, Not predicted. PalmPred: High confidence (score > 0.4), Medium confidence (0.1 < score < 0.4), Low confidence (score < 0.1), Not predicted. |
List of palmitoyl-proteomes
Summary table by organism
Tip: Keep CTRL key pressed down while clicking on column headers to do multiple sorting. This applies to any sortable table on this site.
ID of the experiment | Reference | Year | Organism | Cell type | Subcellular location | Technique(s) | Found? | In list | All lists |
---|---|---|---|---|---|---|---|---|---|
SPalmE:14 | Roth AF et al. | 2006 | Saccharomyces cerevisiae | Isogenic LRB759 | Total membrane | ABE | x | HC HC: 48 hits | |
SPalmE:13 | Kang R et al. | 2008 | Rattus norvegicus | Cortical neuron | Synaptosomal membrane | ABE | x |
HC: 107 hits LC: 308 hits |
|
SPalmE:6 | Martin BR et al. | 2009 | Homo sapiens | Jurkat | Total membrane | Click chemistry | x |
HC: 127 hits LC: 188 hits List: 0 hits |
|
SPalmE:1 | Yang W et al. | 2010 | Homo sapiens | DU145 | Total membrane | ABE | x |
HC: 162 hits LC: 218 hits |
|
SPalmE:10 | Yount JS et al. | 2010 | Mus musculus | Dendritic cell | Total cell lysate | Click chemistry | x |
HC: 59 hits LC: 105 hits |
|
SPalmE:578 | Yang W et al. | 2010 | Homo sapiens | DU145 | Lipid raft | ABE | x |
HC: 102 hits LC: 73 hits |
|
SPalmE:577 | Yang W et al. | 2010 | Homo sapiens | DU145 | Non-lipid raft | ABE | x |
HC: 63 hits LC: 147 hits |
|
SPalmE:12 | Martin BR et al. | 2011 | Mus musculus | BW5147-derived mouse T-cell hybridoma cell | Total membrane | Click chemistry | x |
HC HC: 352 hits LC LC: 8 hits |
|
SPalmE:2 | Dowal L et al. | 2011 | Homo sapiens | Platelet | Total membrane | ABE | x | List: 214 hits | |
SPalmE:8 | Merrick BA et al. | 2011 | Mus musculus | Macrophage Raw 264.7 | Total membrane | ABE | x | List: 69 hits | |
SPalmE:511 | Emmer BT et al. | 2011 | Trypanosoma brucei brucei | NA | Total cell lysate | ABE | x | List: 126 hits | |
SPalmE:5 | Forrester MT et al. | 2011 | Homo sapiens | HEK293 | Total membrane | ARAC | x | List: 69 hits | |
SPalmE:7 | Wilson JP et al. | 2011 | Homo sapiens | Jurkat | Total cell lysate | Click chemistry | x |
HC: 164 hits LC: 178 hits |
|
SPalmE:3 | Ivaldi C et al. | 2012 | Homo sapiens | B-cell | Total membrane | ABE | x | HC HC: 93 hits | |
SPalmE:580 | Jones ML et al. | 2012 | Plasmodium falciparum | Whole organism | Total cell lysate | Click chemistry, SILAC | x |
HC: 79 hits LC: 89 hits |
|
SPalmE:162 | Jones ML et al. | 2012 | Plasmodium falciparum | Whole organism | Total cell lysate | ABE | x |
HC: 100 hits LC: 217 hits |
|
SPalmE:11 | Li Y et al. | 2012 | Mus musculus | Neural stem cell | Total cell lysate | Click chemistry | x | HC HC: 254 hits | |
SPalmE:4 | Marin EP et al. | 2012 | Homo sapiens | Umbilical vein blood | NA | ABE | x | List: 154 hits | |
SPalmE:9 | Ren W et al. | 2013 | Mus musculus | 3T3-L1 and epididymal fat pads | Total membrane | ARAC | x | List: 664 hits | |
SPalmE:15 | Hemsley PA et al. | 2013 | Arabidopsis thaliana | Heyn Col-4 ecotype root cell suspension | Microsomal membrane | ABE | Found | in HC |
HC: 122 hits MC: 94 hits LC: 366 hits |
SPalmE:119 | Wan J et al. | 2013 | Mus musculus | Brain | Total cell lysate | ABE | x | List: 378 hits | |
SPalmE:160 | Zhang MM et al. | 2013 | Schizosaccharomyces pombe | Whole organism | Total cell lysate | Click chemistry | x | List: 238 hits | |
SPalmE:507 | Chesarino NM et al. | 2014 | Mus musculus | DC2.4 | Total cell lysate | Click chemistry | x | List: 246 hits | |
SPalmE:508 | Chesarino NM et al. | 2014 | Mus musculus | MEF | Total cell lysate | Click chemistry | Ortholog | in List [PTK7, FLT3, M3K19, UFO, TYRO3] | List: 436 hits |
SPalmE:184 | Wei X et al. | 2014 | Homo sapiens | HUVEC | Total cell lysate | ABE | x |
Palm decreased: 40 hits Palm increased: 33 hits List: 367 hits |
|
SPalmE:619 | Peng T et al. | 2015 | Homo sapiens | HEK293 | Total cell lysate | Alk16 Labeling | Ortholog | in List [EPHB4, EPHA7, EPHB3, EPHB2, EPHB1, EPHA2, EPHA3, EPHA5, EPHA6, EPHA1, IGF1R] | List: 354 hits |
SPalmE:504 | Serwa RA et al. | 2015 | Homo sapiens | RPE-1 | Total cell lysate | SILAC, 16-HDYA labeling | Ortholog | in List [EPHB4, EPHA7, EPHB3, EPHB2, EPHB1, EPHA2, EPHA3, EPHA5, EPHA6, EPHA1, IGF1R] | List: 1348 hits |
SPalmE:620 | Peng T et al. | 2015 | Homo sapiens | HEK293 | Total cell lysate | Photo cleavable x-alk16 labeling | Ortholog | in List [EPHB4, EPHA7, EPHB3, EPHB2, EPHB1, EPHA2, EPHA3, EPHA5, EPHA6, EPHA1, IGF1R] | List: 354 hits |
SPalmE:506 | Morrison E et al. | 2015 | Homo sapiens | Jurkat | Total cell lysate | Click chemistry, SILAC | x | List: 226 hits | |
SPalmE:540 | Gould NS et al. | 2015 | Mus musculus | Liver | Total cell lysate | APE | x | List: 780 hits | |
SPalmE:529 | Colquhoun DR et al. | 2015 | Homo sapiens | 174 x CEM.T1 | Total cell lysate | Click-IT Palmitic Acid labeling | x | List: 113 hits | |
SPalmE:510 | Santiago-Tirado FH et al. | 2015 | Cryptococcus neoformans | NA | Total cell lysate | Click chemistry | x | List: 354 hits | |
SPalmE:509 | Santiago-Tirado FH et al. | 2015 | Cryptococcus neoformans | NA | Total cell lysate | Click chemistry | x | List: 426 hits | |
SPalmE:505 | Morrison E et al. | 2015 | Homo sapiens | Primary CD4 + T cells | Total cell lysate | ABE, In gel SILAC labeling | x | List: 274 hits | |
SPalmE:536 | Foe IT et al. | 2015 | Toxoplasma gondii | NA | Total membrane | Click chemistry | x |
HC: 210 hits MC: 72 hits |
|
SPalmE:902 | Caballero MC et al. | 2016 | Toxoplasma gondii | whole parasite lysates | NA | ABE | x | HC: 164 hits | |
SPalmE:829 | Upadhyay S et al. | 2016 | Aspergillus fumigatus | Conidia | NA | ABE | x | List: 133 hits | |
SPalmE:724 | Fang C et al. | 2016 | Homo sapiens | SW480 | NA | ARAC | x | List: 100 hits | |
SPalmE:909 | Thinon E et al. | 2016 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | Alk16 Labeling | x |
HC: 197 hits MC: 143 hits LC: 302 hits |
|
SPalmE:723 | Hernandez JL et al. | 2016 | Homo sapiens | MCF7 | Total cell lysate | Alk16 Labeling | x | List: 1353 hits | |
SPalmE:698 | Pinner AL et al. | 2016 | Homo sapiens | Brain | Total cell lysate | ABE | x | List: 216 hits | |
SPalmE:993 | Shen LF et al. | 2017 | Mus musculus | Liver | Total membrane | ARAC | x | ZDHHC13 substrates: 16 hits | |
SPalmE:903 | Collins MO et al. | 2017 | Mus musculus | Forebrain | NA | ABE | x | HC: 1079 hits | |
SPalmE:907 | Edmonds MJ et al. | 2017 | Rattus norvegicus | Brain | NA | ARAC | x | List: 95 hits | |
SPalmE:906 | Edmonds MJ et al. | 2017 | Rattus norvegicus | Brain | NA | ABE | x | List: 193 hits | |
SPalmE:855 | Shen LF et al. | 2017 | Mus musculus | Liver | Total membrane | ARAC | x | List: 865 hits | |
SPalmE:1183 | Thinon E et al. | 2018 | Homo sapiens | HeLa | Total cell lysate | NH2OH cleavage of thioester bond, Alk16 Labeling | x |
HC: 132 hits MC: 138 hits LC: 110 hits |
|
SPalmE:1184 | Thinon E et al. | 2018 | Homo sapiens | HeLa | Total cell lysate | ARAC | x |
HC: 545 hits MC: 415 hits LC: 219 hits |
|
SPalmE:1182 | Thinon E et al. | 2018 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | ARAC | x |
HC: 198 hits MC: 143 hits LC: 120 hits |
|
SPalmE:1186 | Thinon E et al. | 2018 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | NH2OH cleavage of thioester bond, Alk16 Labeling | x |
HC: 177 hits MC: 162 hits LC: 123 hits |
|
SPalmE:1181 | Thinon E et al. | 2018 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | NH2OH cleavage of thioester bond, Alk16 Labeling | x |
HC: 244 hits MC: 187 hits LC: 120 hits |
|
SPalmE:1191 | Won SJ et al. | 2018 | Homo sapiens | HEK293T | Total cell lysate | Click chemistry | x | List: 195 hits | |
SPalmE:1192 | Won SJ et al. | 2018 | Homo sapiens | HAP1 | Total cell lysate | Click chemistry | x | List: 984 hits | |
SPalmE:1193 | Won SJ et al. | 2018 | Homo sapiens | HAP1 | Total cell lysate | ARAC | x | List: 1394 hits | |
SPalmE:1194 | Won SJ et al. | 2018 | Homo sapiens | HAP1 | Total cell lysate | ARAC, | x | List: 1404 hits | |
SPalmE:1203 | Zhang X et al. | 2018 | Mus musculus | Brain | Total membrane | Enrichment by magnetic nanoparticles | x |
HC: 917 hits MC: 352 hits LC: 15 hits |
|
SPalmE:1259 | Dumoulin A et al. | 2018 | Mus musculus | F11 | Total membrane | ABE, NH2OH cleavage of thioester bond, LC-MS | x |
HC: 1 hits MC: 10 hits LC: 4 hits |
|
SPalmE:1260 | Wang Z et al. | 2018 | Bos taurus | Lens fiber cell | Total cell lysate | ABE, NH2OH cleavage of thioester bond, LC-MS | x | List: 52 hits | |
SPalmE:920 | Sobocińska J et al. | 2018 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | Click chemistry | x | LPS treatment: 646 hits | |
SPalmE:919 | Sobocińska J et al. | 2018 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | Click chemistry | x | List: 646 hits | |
SPalmE:908 | Sobocińska J et al. | 2018 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | Click chemistry | x |
Palm. up with LPS: 156 hits Palm. down with LPS: 189 hits |
|
SPalmE:1185 | Thinon E et al. | 2018 | Homo sapiens | HeLa | Total cell lysate | NH2OH cleavage of thioester bond, LC-MS, Alk16 Labeling | x |
Chymotrypsin: 286 hits Trypsin: 1291 hits |
|
SPalmE:1187 | Thinon E et al. | 2018 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | ARAC | x |
HC: 281 hits MC: 139 hits LC: 113 hits |
|
SPalmE:1303 | Zaręba-Kozioł M et al. | 2019 | Mus musculus | Brain | Postsynaptic density fraction | ABE, NH2OH cleavage of thioester bond, LC-MS | x | ||
SPalmE:1270 | Strassburger K et al. | 2019 | Drosophila melanogaster | Circa 160 L2 larvae | Total cell lysate | ABE, NH2OH cleavage of thioester bond, PAT KO, MS | x | List: 13 hits | |
SPalmE:1266 | Strassburger K et al. | 2019 | Drosophila melanogaster | Circa 160 L2 larvae | Total cell lysate | ABE, NH2OH cleavage of thioester bond, PAT KO, MS | x | List: 157 hits | |
SPalmE:1265 | Wang J et al. | 2019 | Mus musculus | 3T3-L1 | Total membrane | MS, BioID | x | List: 9 hits | |
SPalmE:1333 | Zaręba-Kozioł M et al. | 2019 | Mus musculus | Brain | Postsynaptic density fraction | ABE, NH2OH cleavage of thioester bond, LC-MS | x | ||
SPalmE:1433 | Zhou B et al. | 2019 | Homo sapiens | LNCaP | Total cell lysate | NH2OH cleavage of thioester bond, LC-MS, LB-ABE, ABE | Ortholog | in List [EPHB4, EPHA7, EPHB3, EPHB2, EPHB1, EPHA2, EPHA3, EPHA5, EPHA6, EPHA1, IGF1R] | List: 2929 hits |
SPalmE:1432 | Zhou B et al. | 2019 | Homo sapiens | LNCaP | Total cell lysate | ABE, SILAC, NH2OH cleavage of thioester bond, LC-MS | Ortholog | in List [EPHB4, EPHA7, EPHB3, EPHB2, EPHB1, EPHA2, EPHA3, EPHA5, EPHA6, EPHA1, IGF1R] | List: 590 hits |
SPalmE:1434 | Wegleiter T et al. | 2019 | Mus musculus | Neural stem cell | Total cell lysate | ABE, NH2OH cleavage of thioester bond, LC-MS | x | List: 370 hits | |
SPalmE:1438 | Mariscal J et al. | 2020 | Homo sapiens | PC3 | Total membrane | ARAC, NH2OH cleavage of thioester bond, LC-MS, LB-ABE | Ortholog | in HC [EPHB4, EPHA7, EPHB3, EPHB2, EPHB1, EPHA2, EPHA3, EPHA5, EPHA6, EPHA1, IGF1R] | HC: 1837 hits |
SPalmE:1439 | Mariscal J et al. | 2020 | Homo sapiens | PC3 | Large Extracellular Vesicles | ARAC, NH2OH cleavage of thioester bond, LC-MS, LB-ABE | Ortholog | in HC [EPHB4, EPHA7, EPHB3, EPHB2, EPHB1, EPHA2, EPHA3, EPHA5, EPHA6, EPHA1, IGF1R] | HC: 1350 hits |
SPalmE:1440 | Mariscal J et al. | 2020 | Homo sapiens | PC3 | Small Extracellular Vesicles | ARAC, NH2OH cleavage of thioester bond, LC-MS, LB-ABE | Ortholog | in HC [EPHB4, EPHA7, EPHB3, EPHB2, EPHB1, EPHA2, EPHA3, EPHA5, EPHA6, EPHA1, IGF1R] | HC: 600 hits |
SPalmE:1435 | Morrison E et al. | 2020 | Homo sapiens | Jurkat | Total cell lysate | ABE, NH2OH cleavage of thioester bond, LC-MS, SILAC | x | Unstimulated: 37 hits | |
SPalmE:1436 | Morrison E et al. | 2020 | Homo sapiens | Jurkat | Total cell lysate | ABE, NH2OH cleavage of thioester bond, LC-MS, SILAC | x | List: 185 hits | |
SPalmE:1458 | Morrison E et al. | 2020 | Homo sapiens | Jurkat | Total cell lysate | ABE, NH2OH cleavage of thioester bond, LC-MS, SILAC | x | Stimulated: 148 hits | |
SPalmE:1437 | Mariscal J et al. | 2020 | Homo sapiens | PC3 | Total cell lysate | ARAC, NH2OH cleavage of thioester bond, LC-MS, LB-ABE | Ortholog | in HC [EPHB4, EPHA7, EPHB3, EPHB2, EPHB1, EPHA2, EPHA3, EPHA5, EPHA6, EPHA1, IGF1R] | HC: 1869 hits |
SPalmE:1450 | Zaręba-Kozioł M et al. | 2021 | Mus musculus | Brain | Synaptoneurosomal fraction | ABE, NH2OH cleavage of thioester bond, LC-MS | Ortholog | in List [PTK7, FLT3, M3K19, UFO, TYRO3] | List: 1093 hits |
SPalmE:1444 | Miles MR et al. | 2021 | Homo sapiens | Heart | Total cell lysate | ARAC, NH2OH cleavage of thioester bond, LC-MS | Ortholog | in List [EPHB4, EPHA7, EPHB3, EPHB2, EPHB1, EPHA2, EPHA3, EPHA5, EPHA6, EPHA1, IGF1R] | List: 687 hits |
SPalmE:1447 | Pradhan AJ et al. | 2021 | Homo sapiens | HT-29 | Total cell lysate | Labeling of substrate with C20 AlkFA (Alk-18), LC-MS | Ortholog | in List [EPHB4, EPHA7, EPHB3, EPHB2, EPHB1, EPHA2, EPHA3, EPHA5, EPHA6, EPHA1, IGF1R] | List: 1173 hits |
SPalmE:1448 | Pradhan AJ et al. | 2021 | Homo sapiens | HT-29 | Total cell lysate | Labeling of substrate with C20 AlkFA (Alk-18), LC-MS | Ortholog | in List [EPHB4, EPHA7, EPHB3, EPHB2, EPHB1, EPHA2, EPHA3, EPHA5, EPHA6, EPHA1, IGF1R] | List: 770 hits |
SPalmE:1449 | Ripamonti M et al. | 2021 | Mus musculus | NIH-3T3 | Total cell lysate | ARAC, NH2OH cleavage of thioester bond, LC-MS | x | List: 199 hits | |
SPalmE:1445 | Miles MR et al. | 2021 | Rattus norvegicus | Heart | Total cell lysate | ARAC, NH2OH cleavage of thioester bond, LC-MS | x | List: 399 hits | |
SPalmE:1451 | Zaręba-Kozioł M et al. | 2021 | Mus musculus | Brain | Synaptoneurosomal fraction | ABE, NH2OH cleavage of thioester bond, LC-MS | x | List: 1048 hits | |
SPalmE:1452 | Zaręba-Kozioł M et al. | 2021 | Mus musculus | Brain | Synaptoneurosomal fraction | ABE, NH2OH cleavage of thioester bond, LC-MS | Ortholog | in List [PTK7, FLT3, M3K19, UFO, TYRO3] | List: 1112 hits |
SPalmE:1453 | Zaręba-Kozioł M et al. | 2021 | Mus musculus | Brain | Synaptoneurosomal fraction | ABE, NH2OH cleavage of thioester bond, LC-MS | x | List: 1040 hits | |
SPalmE:1455 | Ziemlińska E et al. | 2021 | Mus musculus | Liver | Total membrane | ABE, NH2OH cleavage of thioester bond, LC-MS | x |
HC: 850 hits MC: 303 hits LC: 21 hits |
|
SPalmE:1446 | Miles MR et al. | 2021 | Canis familiaris | Heart | Total cell lysate | ARAC, NH2OH cleavage of thioester bond, LC-MS | x | List: 464 hits | |
SPalmE:1454 | Ziemlińska E et al. | 2021 | Mus musculus | Liver | Total membrane | ABE, NH2OH cleavage of thioester bond, LC-MS | x |
HC: 675 hits MC: 360 hits LC: 27 hits |
|
SPalmE:1443 | Uzbekova S et al. | 2021 | Bos taurus | Bovine follicular cells | Total cell lysate | ABE, NH2OH cleavage of thioester bond, LC-MS | x | List: 80 hits | |
SPalmE:1456 | Gao J et al. | 2022 | Mus musculus | Testis | Total cell lysate | ABE, NH2OH cleavage of thioester bond, LC-MS | Ortholog | in HC [PTK7, FLT3, M3K19, UFO, TYRO3] | HC: 4107 hits |
SPalmE:1442 | Gorenberg EL et al. | 2022 | Mus musculus | Brain | Total cell lysate | ARAC, NH2OH cleavage of thioester bond, LC-MS | Ortholog | in List [PTK7, FLT3, M3K19, UFO, TYRO3] | List: 1597 hits |
SPalmE:1441 | Gorenberg EL et al. | 2022 | Mus musculus | Brain | Synaptic fraction | ARAC, NH2OH cleavage of thioester bond, LC-MS | x | List: 1378 hits | |
SPalmE:1457 | Gao J et al. | 2022 | Mus musculus | Testis | Total cell lysate | ABE, NH2OH cleavage of thioester bond, LC-MS | Ortholog | in HC [PTK7, FLT3, M3K19, UFO, TYRO3] | HC: 3870 hits |
Summary table by organism
Organism | Total number of palmitoyl-proteome articles | Total number of palmitoyl-proteomes | Number of palmitoyl-proteomes containing this protein or an ortholog | % of palmitoyl-proteomes containing this protein or an ortholog | Orthologs |
---|---|---|---|---|---|
S. cerevisiae S288c | 1 | 1 | 0 | 0.0 | NA |
R. norvegicus | 3 | 4 | 0 | 0.0 | NA |
H. sapiens | 22 | 38 | 12 | 31.6 | EPHB4_HUMAN , EPHA7_HUMAN , EPHB3_HUMAN , EPHB2_HUMAN , EPHB1_HUMAN , EPHA2_HUMAN , EPHA3_HUMAN , EPHA5_HUMAN , EPHA6_HUMAN , EPHA1_HUMAN , IGF1R_HUMAN |
M. musculus | 23 | 37 | 6 | 16.2 | PTK7_MOUSE , FLT3_MOUSE , M3K19_MOUSE , UFO_MOUSE , TYRO3_MOUSE |
T. brucei brucei | 1 | 1 | 0 | 0.0 | NA |
P. falciparum | 1 | 2 | 0 | 0.0 | NA |
A. thaliana | 1 | 1 | 1 | 100.0 | NA |
S. pombe | 1 | 1 | 0 | 0.0 | NA |
C. neoformans var. grubii serotype A strain H99 | 1 | 2 | 0 | 0.0 | NA |
T. gondii | 2 | 2 | 0 | 0.0 | NA |
A. fumigatus | 1 | 1 | 0 | 0.0 | NA |
B. taurus | 2 | 2 | 0 | 0.0 | NA |
D. melanogaster | 1 | 2 | 0 | 0.0 | NA |
C. familiaris | 1 | 1 | 0 | 0.0 | NA |