General info Cross-references Sequences Orthologs Ortholog sequences Predictions Palmitoyl-proteomes References
Palmitoyl-proteomes
1/1
article for arabidopsis thaliana
16 orthologs
16 orthologs
Validation experiments
0
experiment
0 ortholog
0 ortholog
Curated sites & Enzymes
0
site from validation experiments*
0 site from palmitoyl-proteomes*
No PAT known
No APT known
*In main isoform only
0 site from palmitoyl-proteomes*
No PAT known
No APT known
*In main isoform only
Predictions
Predicted
3
cysteines in main isoform
Protein names
Probable receptor-like protein kinase At1g30570, EC 2.7.11.-
Subcellular location
Cell membrane (Potential)
Isoforms & protein length
Isoform 1 (main): 849 aa
Known functions
Source | Identifiers |
---|---|
UniProt gene names | At1g30570, T5I8.2 |
Refseq protein ID | NP_174345.1 |
IPI ID | IPI00531747 |
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UniProt AC | st. | UniProt ID | Orthology source | Organism | Gene names | Protein name | Palmitome articles | Times validated | Techniques | Sites | Predicted |
---|---|---|---|---|---|---|---|---|---|---|---|
Q06807 | TIE2_BOVIN | MetaPhors | B. taurus | TEK, TIE-2, TIE2 | Angiopoietin-1 receptor, EC 2.7.10.1 | 0/2 | 0 | 0 | 0 | Yes | |
Q13546 | RIPK1_HUMAN | MetaPhors | H. sapiens | RIPK1, RIP, RIP1 | Receptor-interacting serine/threonine-protein kinase 1, EC 2.7.11.1 | 0/22 | 0 | 0 | 0 | No | |
P54762 | EPHB1_HUMAN | MetaPhors | H. sapiens | EPHB1, ELK, EPHT2, HEK6, NET | Ephrin type-B receptor 1, EC 2.7.10.1 | 1/22 | 0 | 2 | 0 | Yes | |
Q9URT9 | GSK31_SCHPO | MetaPhors | S. pombe | gsk31, pi064, SPBC8D2.01 | Protein kinase gsk31 | 0/1 | 0 | 0 | 0 | No | |
Q9V6K3 | ROR2_DROME | MetaPhors | D. melanogaster | Nrk, ROR2, CG4007 | Tyrosine-protein kinase transmembrane receptor Ror2, dRor2, EC 2.7.10.1 | 0/1 | 0 | 0 | 0 | Yes | |
P83097 | WSCK_DROME | MetaPhors | D. melanogaster | Wsck, CG31127 | Putative inactive tyrosine-protein kinase Wsck | 0/1 | 0 | 0 | 0 | Yes | |
Q7KJ08 | Q7KJ08_DROME | MetaPhors | D. melanogaster | ALK, alk, DAlk, dALK, dAlk, DAlk53, Dmel\CG8250, mili, Alk, CG8250, Dmel_CG8250 | Receptor protein-tyrosine kinase | 0/1 | 0 | 0 | 0 | No | |
A6NIV6 | LRIQ4_HUMAN | MetaPhors | H. sapiens | LRRIQ4, LRRC64 | Leucine-rich repeat and IQ domain-containing protein 4 | 0/22 | 0 | 0 | 0 | No | |
O15146 | MUSK_HUMAN | MetaPhors | H. sapiens | MUSK | Muscle, skeletal receptor tyrosine-protein kinase, EC 2.7.10.1 | 0/22 | 0 | 0 | 0 | Yes | |
P15056 | BRAF_HUMAN | MetaPhors | H. sapiens | BRAF, BRAF1, RAFB1 | Serine/threonine-protein kinase B-raf, EC 2.7.11.1 | 0/22 | 0 | 0 | 0 | Yes | |
P08922 | ROS1_HUMAN | MetaPhors | H. sapiens | ROS1, MCF3, ROS | Proto-oncogene tyrosine-protein kinase ROS, EC 2.7.10.1 | 0/22 | 0 | 0 | 0 | Yes | |
P42685 | FRK_HUMAN | MetaPhors | H. sapiens | FRK, PTK5, RAK | Tyrosine-protein kinase FRK, EC 2.7.10.2 | 2/22 | 0 | 3 | 0 | Yes | |
P35968 | VGFR2_HUMAN | MetaPhors | H. sapiens | KDR, FLK1, VEGFR2 | Vascular endothelial growth factor receptor 2, VEGFR-2, EC 2.7.10.1 | 0/22 | 0 | 0 | 0 | Yes | |
Q13470 | TNK1_HUMAN | MetaPhors | H. sapiens | TNK1 | Non-receptor tyrosine-protein kinase TNK1, EC 2.7.10.2 | 0/22 | 0 | 0 | 0 | Yes | |
P07332 | FES_HUMAN | MetaPhors | H. sapiens | FES, FPS | Tyrosine-protein kinase Fes/Fps, EC 2.7.10.2 | 0/22 | 0 | 0 | 0 | Yes | |
Q16288 | NTRK3_HUMAN | MetaPhors | H. sapiens | NTRK3, TRKC | NT-3 growth factor receptor, EC 2.7.10.1 | 0/22 | 0 | 0 | 0 | Yes | |
P07949 | RET_HUMAN | MetaPhors | H. sapiens | RET, CDHF12, CDHR16, PTC, RET51 | Proto-oncogene tyrosine-protein kinase receptor Ret, EC 2.7.10.1 | 0/22 | 0 | 0 | 0 | Yes | |
P29317 | EPHA2_HUMAN | MetaPhors | H. sapiens | EPHA2, ECK | Ephrin type-A receptor 2, EC 2.7.10.1 | 3/22 | 0 | 3 | 0 | Yes | |
Q8N1G4 | LRC47_HUMAN | MetaPhors | H. sapiens | LRRC47, KIAA1185 | Leucine-rich repeat-containing protein 47 | 4/22 | 0 | 3 | 0 | No | |
F1LT49 | F1LT49_RAT | MetaPhors | R. norvegicus | Lrrc47 | Leucine-rich repeat-containing 47 | 0/3 | 0 | 0 | 0 | No | |
Q505F5 | LRC47_MOUSE | MetaPhors | M. musculus | Lrrc47, Kiaa1185 | Leucine-rich repeat-containing protein 47 | 2/23 | 0 | 2 | 0 | No | |
Q6VNS1 | NTRK3_MOUSE | MetaPhors | M. musculus | Ntrk3, TrkC | NT-3 growth factor receptor, EC 2.7.10.1 | 0/23 | 0 | 0 | 0 | Yes | |
P16056 | MET_MOUSE | MetaPhors | M. musculus | Met | Hepatocyte growth factor receptor, HGF receptor, EC 2.7.10.1 | 2/23 | 0 | 2 | 0 | Yes | |
A7Z039 | A7Z039_BOVIN | MetaPhors | B. taurus | ITK | Tyrosine-protein kinase | 0/2 | 0 | 0 | 0 | No | |
D3ZYM4 | D3ZYM4_RAT | MetaPhors | R. norvegicus | Mst1r | Receptor protein-tyrosine kinase | 0/3 | 0 | 0 | 0 | No | |
P22607 | FGFR3_HUMAN | InParanoid | H. sapiens | FGFR3, JTK4 | Fibroblast growth factor receptor 3, FGFR-3, EC 2.7.10.1 | 0/22 | 0 | 0 | 0 | Yes | |
P21802 | FGFR2_HUMAN | InParanoid | H. sapiens | FGFR2, BEK, KGFR, KSAM | Fibroblast growth factor receptor 2, FGFR-2, EC 2.7.10.1 | 0/22 | 0 | 0 | 0 | Yes | |
P11362 | FGFR1_HUMAN | InParanoid | H. sapiens | FGFR1, BFGFR, CEK, FGFBR, FLG, FLT2, HBGFR | Fibroblast growth factor receptor 1, FGFR-1, EC 2.7.10.1 | 2/22 | 0 | 2 | 0 | Yes | |
P22455 | FGFR4_HUMAN | InParanoid | H. sapiens | FGFR4, JTK2, TKF | Fibroblast growth factor receptor 4, FGFR-4, EC 2.7.10.1 | 1/22 | 0 | 2 | 0 | Yes | |
P09619 | PGFRB_HUMAN | InParanoid | H. sapiens | PDGFRB, PDGFR, PDGFR1 | Platelet-derived growth factor receptor beta, PDGF-R-beta, PDGFR-beta, EC 2.7.10.1 | 0/22 | 0 | 0 | 0 | No | |
P10721 | KIT_HUMAN | InParanoid | H. sapiens | KIT, SCFR | Mast/stem cell growth factor receptor Kit, SCFR, EC 2.7.10.1 | 0/22 | 0 | 0 | 0 | Yes | |
P16234 | PGFRA_HUMAN | InParanoid | H. sapiens | PDGFRA, PDGFR2, RHEPDGFRA | Platelet-derived growth factor receptor alpha, PDGF-R-alpha, PDGFR-alpha, EC 2.7.10.1 | 0/22 | 0 | 0 | 0 | Yes | |
P07333 | CSF1R_HUMAN | InParanoid | H. sapiens | CSF1R, FMS | Macrophage colony-stimulating factor 1 receptor | 0/22 | 0 | 0 | 0 | Yes | |
Q06418 | TYRO3_HUMAN | InParanoid | H. sapiens | TYRO3, BYK, DTK, RSE, SKY, TIF | Tyrosine-protein kinase receptor TYRO3, EC 2.7.10.1 | 0/22 | 0 | 0 | 0 | No | |
Q13308 | PTK7_HUMAN | InParanoid | H. sapiens | PTK7, CCK4 | Inactive tyrosine-protein kinase 7 | 10/22 | 0 | 3 | 0 | Yes | |
P09581 | CSF1R_MOUSE | InParanoid | M. musculus | Csf1r, Csfmr, Fms | Macrophage colony-stimulating factor 1 receptor | 0/23 | 0 | 0 | 0 | Yes | |
Q61851 | FGFR3_MOUSE | InParanoid | M. musculus | Fgfr3, Mfr3, Sam3 | Fibroblast growth factor receptor 3, FGFR-3, EC 2.7.10.1 | 0/23 | 0 | 0 | 0 | Yes | |
P21803 | FGFR2_MOUSE | InParanoid | M. musculus | Fgfr2, Bek, Ect1 | Fibroblast growth factor receptor 2, FGFR-2, EC 2.7.10.1 | 0/23 | 0 | 0 | 0 | Yes | |
P16092 | FGFR1_MOUSE | InParanoid | M. musculus | Fgfr1, Flg | Fibroblast growth factor receptor 1, FGFR-1, bFGF-R-1, EC 2.7.10.1 | 0/23 | 0 | 0 | 0 | Yes | |
Q03142 | FGFR4_MOUSE | InParanoid | M. musculus | Fgfr4, Fgfr-4, Mpk-11 | Fibroblast growth factor receptor 4, FGFR-4, EC 2.7.10.1 | 0/23 | 0 | 0 | 0 | Yes | |
P05622 | PGFRB_MOUSE | InParanoid | M. musculus | Pdgfrb, Pdgfr, Pdgfr1 | Platelet-derived growth factor receptor beta, PDGF-R-beta, PDGFR-beta, EC 2.7.10.1 | 0/23 | 0 | 0 | 0 | No | |
Q00342 | FLT3_MOUSE | InParanoid | M. musculus | Flt3, Flk-2, Flt-3 | Receptor-type tyrosine-protein kinase FLT3, EC 2.7.10.1 | 1/23 | 0 | 2 | 0 | Yes | |
Q61006 | MUSK_MOUSE | InParanoid | M. musculus | Musk, Nsk2 | Muscle, skeletal receptor tyrosine-protein kinase, EC 2.7.10.1 | 0/23 | 0 | 0 | 0 | Yes | |
P55144 | TYRO3_MOUSE | InParanoid | M. musculus | Tyro3, Dtk, Rse, Tif | Tyrosine-protein kinase receptor TYRO3, EC 2.7.10.1 | 1/23 | 0 | 2 | 0 | Yes | |
Q00993 | UFO_MOUSE | InParanoid | M. musculus | Axl, Ark, Ufo | Tyrosine-protein kinase receptor UFO, EC 2.7.10.1 | 1/23 | 0 | 2 | 0 | Yes | |
Q8BKG3 | PTK7_MOUSE | InParanoid | M. musculus | Ptk7 | Inactive tyrosine-protein kinase 7 | 2/23 | 0 | 3 | 0 | Yes | |
Q60805 | MERTK_MOUSE | InParanoid | M. musculus | Mertk, Mer | Tyrosine-protein kinase Mer, EC 2.7.10.1 | 0/23 | 0 | 0 | 0 | Yes | |
Q3UFB7 | NTRK1_MOUSE | InParanoid | M. musculus | Ntrk1 | High affinity nerve growth factor receptor, EC 2.7.10.1 | 0/23 | 0 | 0 | 0 | Yes | |
F1PXW8 | F1PXW8_CANLF | InParanoid | C. familiaris | EPHA5 | EPH receptor A5 | 0/1 | 0 | 0 | 0 | Yes | |
F1PNA5 | F1PNA5_CANLF | InParanoid | C. familiaris | EPHB1 | EPH receptor B1 | 0/1 | 0 | 0 | 0 | Yes | |
F1PAF1 | F1PAF1_CANLF | InParanoid | C. familiaris | EPHB2 | EPH receptor B2 | 0/1 | 0 | 0 | 0 | Yes | |
F1PYW2 | F1PYW2_CANLF | InParanoid | C. familiaris | EPHA4 | EPH receptor A4 | 0/1 | 0 | 0 | 0 | No | |
F1PRX3 | F1PRX3_CANLF | InParanoid | C. familiaris | EPHA6 | Uncharacterized protein | 0/1 | 0 | 0 | 0 | Yes | |
F1P9P1 | F1P9P1_CANLF | InParanoid | C. familiaris | EPHB3 | EPH receptor B3 | 0/1 | 0 | 0 | 0 | Yes | |
E2R7J5 | E2R7J5_CANLF | InParanoid | C. familiaris | EPHA7 | EPH receptor A7 | 0/1 | 0 | 0 | 0 | Yes | |
F1P925 | F1P925_CANLF | InParanoid | C. familiaris | EPHA3 | EPH receptor A3 | 0/1 | 0 | 0 | 0 | Yes | |
F1PAD6 | F1PAD6_CANLF | InParanoid | C. familiaris | EPHA8 | EPH receptor A8 | 0/1 | 0 | 0 | 0 | Yes | |
F1PRQ8 | F1PRQ8_CANLF | InParanoid | C. familiaris | EPHB4 | EPH receptor B4 | 0/1 | 0 | 0 | 0 | Yes | |
F1PD85 | F1PD85_CANLF | InParanoid | C. familiaris | EPHB6 | EPH receptor B6 | 0/1 | 0 | 0 | 0 | No | |
P54757 | EPHA5_RAT | InParanoid | R. norvegicus | Epha5, Ehk-1, Ekh1, Rek7 | Ephrin type-A receptor 5, EC 2.7.10.1 | 1/3 | 0 | 1 | 0 | Yes | |
P54759 | EPHA7_RAT | InParanoid | R. norvegicus | Epha7, Ehk-3, Ehk3 | Ephrin type-A receptor 7, EC 2.7.10.1 | 0/3 | 0 | 0 | 0 | Yes | |
P09759 | EPHB1_RAT | InParanoid | R. norvegicus | Ephb1, Elk, Epth2, EFNB3 | Ephrin type-B receptor 1, EC 2.7.10.1 | 1/3 | 0 | 1 | 0 | Yes | |
F1MAJ0 | F1MAJ0_RAT | InParanoid | R. norvegicus | Ephb2 | Receptor protein-tyrosine kinase | 0/3 | 0 | 0 | 0 | Yes | |
D3ZH39 | D3ZH39_RAT | InParanoid | R. norvegicus | Ephb3, Ephb3_predicted, rCG_36502 | Receptor protein-tyrosine kinase | 0/3 | 0 | 0 | 0 | Yes | |
O08680 | EPHA3_RAT | InParanoid | R. norvegicus | Epha3, Rek4, Tyro4 | Ephrin type-A receptor 3, EC 2.7.10.1 | 1/3 | 0 | 1 | 0 | Yes | |
D3ZZK3 | D3ZZK3_RAT | InParanoid | R. norvegicus | Epha4 | Receptor protein-tyrosine kinase | 0/3 | 0 | 0 | 0 | Yes | |
P54758 | EPHA6_RAT | InParanoid | R. norvegicus | Epha6, Ehk-2, Ehk2 | Ephrin type-A receptor 6, EC 2.7.10.1 | 0/3 | 0 | 0 | 0 | Yes | |
M0RDA4 | M0RDA4_RAT | InParanoid | R. norvegicus | Ephb4, LOC686310 | Receptor protein-tyrosine kinase | 0/3 | 0 | 0 | 0 | Yes | |
F1LX55 | F1LX55_RAT | InParanoid | R. norvegicus | Epha10 | EPH receptor A10 | 0/3 | 0 | 0 | 0 | Yes | |
P0C0K7 | EPHB6_RAT | InParanoid | R. norvegicus | Ephb6 | Ephrin type-B receptor 6 | 0/3 | 0 | 0 | 0 | No | |
E9PSY0 | E9PSY0_RAT | InParanoid | R. norvegicus | Axl | Receptor protein-tyrosine kinase | 0/3 | 0 | 0 | 0 | Yes | |
Q07407 | FGFR1_DROME | InParanoid | D. melanogaster | htl, FR1, Tk1, CG7223 | Fibroblast growth factor receptor homolog 1, EC 2.7.10.1 | 0/1 | 0 | 0 | 0 | Yes | |
Q09147 | FGFR2_DROME | InParanoid | D. melanogaster | btl, FR2, HD-311, Tk2, CG32134 | Fibroblast growth factor receptor homolog 2, EC 2.7.10.1 | 0/1 | 0 | 0 | 0 | Yes | |
Q6AWJ9 | PTK7_DROME | InParanoid | D. melanogaster | otk, CG8967 | Tyrosine-protein kinase-like otk | 0/1 | 0 | 0 | 0 | Yes | |
F1N781 | F1N781_BOVIN | InParanoid | B. taurus | EPHA5 | Receptor protein-tyrosine kinase | 0/2 | 0 | 0 | 0 | Yes | |
F1MKR1 | F1MKR1_BOVIN | InParanoid | B. taurus | EPHA8 | Receptor protein-tyrosine kinase | 0/2 | 0 | 0 | 0 | No | |
F1N6H6 | F1N6H6_BOVIN | InParanoid | B. taurus | EPHA10 | EPH receptor A10 | 0/2 | 0 | 0 | 0 | Yes | |
F1MC23 | F1MC23_BOVIN | InParanoid | B. taurus | INSRR | Tyrosine-protein kinase receptor | 0/2 | 0 | 0 | 0 | Yes |
Pos in alignment | 14 | 37 | 325 | 454 | 456 | 583 | 622 | 716 | 772 | 828 |
---|---|---|---|---|---|---|---|---|---|---|
Subcell. location | U | E | E | C | C | C | C | C | C | C |
Disulfide | no | no | no | no | no | no | no | no | no | no |
PSIPRED v.4.02 prediction | helix | coil | strand | helix | helix | strand | helix | helix | helix | coil |
UniProt secondary structure | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA |
Pos in isoform 1 [Main]
CSS-Palm 4.0 PalmPred |
Cys14 HC |
Cys37 |
Cys325 |
Cys454 HC |
Cys456 LC HC |
Cys583 |
Cys622 |
Cys716 MC |
Cys772 |
Cys828 |
Legend
Subcell. location | U Undefined E Extracellular/Lumenal T Transmembrane C Cytosolic/Nuclear |
Prediction confidence |
Cysteine position:
Predicted (high confidence prediction with CSS-Palm or/and PalmPred) and validated (in terms of disulfide bonds and cellular location) / Predicted but not validated (in terms of disulfide bond and cellular location) / Not predicted CSS-Palm 4.0: High confidence, Medium confidence, Low confidence, Not predicted. PalmPred: High confidence (score > 0.4), Medium confidence (0.1 < score < 0.4), Low confidence (score < 0.1), Not predicted. |
List of palmitoyl-proteomes
Summary table by organism
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ID of the experiment | Reference | Year | Organism | Cell type | Subcellular location | Technique(s) | Found? | In list | All lists |
---|---|---|---|---|---|---|---|---|---|
SPalmE:14 | Roth AF et al. | 2006 | Saccharomyces cerevisiae | Isogenic LRB759 | Total membrane | ABE | x | HC HC: 48 hits | |
SPalmE:13 | Kang R et al. | 2008 | Rattus norvegicus | Cortical neuron | Synaptosomal membrane | ABE | Ortholog | in LC,HC [EPHA3, EPHB1, EPHA5] |
HC: 107 hits LC: 308 hits |
SPalmE:6 | Martin BR et al. | 2009 | Homo sapiens | Jurkat | Total membrane | Click chemistry | Ortholog | in LC [FGFR1, PTK7, EPHB1, EPHA2, FRK, LRC47, FGFR4] |
HC: 127 hits LC: 188 hits List: 0 hits |
SPalmE:1 | Yang W et al. | 2010 | Homo sapiens | DU145 | Total membrane | ABE | x |
HC: 162 hits LC: 218 hits |
|
SPalmE:10 | Yount JS et al. | 2010 | Mus musculus | Dendritic cell | Total cell lysate | Click chemistry | x |
HC: 59 hits LC: 105 hits |
|
SPalmE:578 | Yang W et al. | 2010 | Homo sapiens | DU145 | Lipid raft | ABE | x |
HC: 102 hits LC: 73 hits |
|
SPalmE:577 | Yang W et al. | 2010 | Homo sapiens | DU145 | Non-lipid raft | ABE | Ortholog | in HC [FGFR1, PTK7, EPHB1, EPHA2, FRK, LRC47, FGFR4] |
HC: 63 hits LC: 147 hits |
SPalmE:12 | Martin BR et al. | 2011 | Mus musculus | BW5147-derived mouse T-cell hybridoma cell | Total membrane | Click chemistry | x |
HC HC: 352 hits LC LC: 8 hits |
|
SPalmE:2 | Dowal L et al. | 2011 | Homo sapiens | Platelet | Total membrane | ABE | Ortholog | in List [FGFR1, PTK7, EPHB1, EPHA2, FRK, LRC47, FGFR4] | List: 214 hits |
SPalmE:8 | Merrick BA et al. | 2011 | Mus musculus | Macrophage Raw 264.7 | Total membrane | ABE | x | List: 69 hits | |
SPalmE:511 | Emmer BT et al. | 2011 | Trypanosoma brucei brucei | NA | Total cell lysate | ABE | x | List: 126 hits | |
SPalmE:5 | Forrester MT et al. | 2011 | Homo sapiens | HEK293 | Total membrane | ARAC | x | List: 69 hits | |
SPalmE:7 | Wilson JP et al. | 2011 | Homo sapiens | Jurkat | Total cell lysate | Click chemistry | x |
HC: 164 hits LC: 178 hits |
|
SPalmE:3 | Ivaldi C et al. | 2012 | Homo sapiens | B-cell | Total membrane | ABE | x | HC HC: 93 hits | |
SPalmE:580 | Jones ML et al. | 2012 | Plasmodium falciparum | Whole organism | Total cell lysate | Click chemistry, SILAC | x |
HC: 79 hits LC: 89 hits |
|
SPalmE:162 | Jones ML et al. | 2012 | Plasmodium falciparum | Whole organism | Total cell lysate | ABE | x |
HC: 100 hits LC: 217 hits |
|
SPalmE:11 | Li Y et al. | 2012 | Mus musculus | Neural stem cell | Total cell lysate | Click chemistry | x | HC HC: 254 hits | |
SPalmE:4 | Marin EP et al. | 2012 | Homo sapiens | Umbilical vein blood | NA | ABE | x | List: 154 hits | |
SPalmE:9 | Ren W et al. | 2013 | Mus musculus | 3T3-L1 and epididymal fat pads | Total membrane | ARAC | Ortholog | in List [PTK7, MET, LRC47, FLT3, UFO, TYRO3] | List: 664 hits |
SPalmE:15 | Hemsley PA et al. | 2013 | Arabidopsis thaliana | Heyn Col-4 ecotype root cell suspension | Microsomal membrane | ABE | Found | in LC |
HC: 122 hits MC: 94 hits LC: 366 hits |
SPalmE:119 | Wan J et al. | 2013 | Mus musculus | Brain | Total cell lysate | ABE | x | List: 378 hits | |
SPalmE:160 | Zhang MM et al. | 2013 | Schizosaccharomyces pombe | Whole organism | Total cell lysate | Click chemistry | x | List: 238 hits | |
SPalmE:507 | Chesarino NM et al. | 2014 | Mus musculus | DC2.4 | Total cell lysate | Click chemistry | x | List: 246 hits | |
SPalmE:508 | Chesarino NM et al. | 2014 | Mus musculus | MEF | Total cell lysate | Click chemistry | Ortholog | in List [PTK7, MET, LRC47, FLT3, UFO, TYRO3] | List: 436 hits |
SPalmE:184 | Wei X et al. | 2014 | Homo sapiens | HUVEC | Total cell lysate | ABE | Ortholog | in List [FGFR1, PTK7, EPHB1, EPHA2, FRK, LRC47, FGFR4] |
Palm decreased: 40 hits Palm increased: 33 hits List: 367 hits |
SPalmE:619 | Peng T et al. | 2015 | Homo sapiens | HEK293 | Total cell lysate | Alk16 Labeling | Ortholog | in List [FGFR1, PTK7, EPHB1, EPHA2, FRK, LRC47, FGFR4] | List: 354 hits |
SPalmE:504 | Serwa RA et al. | 2015 | Homo sapiens | RPE-1 | Total cell lysate | SILAC, 16-HDYA labeling | Ortholog | in List [FGFR1, PTK7, EPHB1, EPHA2, FRK, LRC47, FGFR4] | List: 1348 hits |
SPalmE:620 | Peng T et al. | 2015 | Homo sapiens | HEK293 | Total cell lysate | Photo cleavable x-alk16 labeling | Ortholog | in List [FGFR1, PTK7, EPHB1, EPHA2, FRK, LRC47, FGFR4] | List: 354 hits |
SPalmE:506 | Morrison E et al. | 2015 | Homo sapiens | Jurkat | Total cell lysate | Click chemistry, SILAC | Ortholog | in List [FGFR1, PTK7, EPHB1, EPHA2, FRK, LRC47, FGFR4] | List: 226 hits |
SPalmE:540 | Gould NS et al. | 2015 | Mus musculus | Liver | Total cell lysate | APE | x | List: 780 hits | |
SPalmE:529 | Colquhoun DR et al. | 2015 | Homo sapiens | 174 x CEM.T1 | Total cell lysate | Click-IT Palmitic Acid labeling | x | List: 113 hits | |
SPalmE:510 | Santiago-Tirado FH et al. | 2015 | Cryptococcus neoformans | NA | Total cell lysate | Click chemistry | x | List: 354 hits | |
SPalmE:509 | Santiago-Tirado FH et al. | 2015 | Cryptococcus neoformans | NA | Total cell lysate | Click chemistry | x | List: 426 hits | |
SPalmE:505 | Morrison E et al. | 2015 | Homo sapiens | Primary CD4 + T cells | Total cell lysate | ABE, In gel SILAC labeling | x | List: 274 hits | |
SPalmE:536 | Foe IT et al. | 2015 | Toxoplasma gondii | NA | Total membrane | Click chemistry | x |
HC: 210 hits MC: 72 hits |
|
SPalmE:902 | Caballero MC et al. | 2016 | Toxoplasma gondii | whole parasite lysates | NA | ABE | x | HC: 164 hits | |
SPalmE:829 | Upadhyay S et al. | 2016 | Aspergillus fumigatus | Conidia | NA | ABE | x | List: 133 hits | |
SPalmE:724 | Fang C et al. | 2016 | Homo sapiens | SW480 | NA | ARAC | x | List: 100 hits | |
SPalmE:909 | Thinon E et al. | 2016 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | Alk16 Labeling | x |
HC: 197 hits MC: 143 hits LC: 302 hits |
|
SPalmE:723 | Hernandez JL et al. | 2016 | Homo sapiens | MCF7 | Total cell lysate | Alk16 Labeling | Ortholog | in List [FGFR1, PTK7, EPHB1, EPHA2, FRK, LRC47, FGFR4] | List: 1353 hits |
SPalmE:698 | Pinner AL et al. | 2016 | Homo sapiens | Brain | Total cell lysate | ABE | x | List: 216 hits | |
SPalmE:993 | Shen LF et al. | 2017 | Mus musculus | Liver | Total membrane | ARAC | x | ZDHHC13 substrates: 16 hits | |
SPalmE:903 | Collins MO et al. | 2017 | Mus musculus | Forebrain | NA | ABE | x | HC: 1079 hits | |
SPalmE:907 | Edmonds MJ et al. | 2017 | Rattus norvegicus | Brain | NA | ARAC | x | List: 95 hits | |
SPalmE:906 | Edmonds MJ et al. | 2017 | Rattus norvegicus | Brain | NA | ABE | x | List: 193 hits | |
SPalmE:855 | Shen LF et al. | 2017 | Mus musculus | Liver | Total membrane | ARAC | x | List: 865 hits | |
SPalmE:1183 | Thinon E et al. | 2018 | Homo sapiens | HeLa | Total cell lysate | NH2OH cleavage of thioester bond, Alk16 Labeling | x |
HC: 132 hits MC: 138 hits LC: 110 hits |
|
SPalmE:1184 | Thinon E et al. | 2018 | Homo sapiens | HeLa | Total cell lysate | ARAC | x |
HC: 545 hits MC: 415 hits LC: 219 hits |
|
SPalmE:1182 | Thinon E et al. | 2018 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | ARAC | x |
HC: 198 hits MC: 143 hits LC: 120 hits |
|
SPalmE:1186 | Thinon E et al. | 2018 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | NH2OH cleavage of thioester bond, Alk16 Labeling | x |
HC: 177 hits MC: 162 hits LC: 123 hits |
|
SPalmE:1181 | Thinon E et al. | 2018 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | NH2OH cleavage of thioester bond, Alk16 Labeling | x |
HC: 244 hits MC: 187 hits LC: 120 hits |
|
SPalmE:1191 | Won SJ et al. | 2018 | Homo sapiens | HEK293T | Total cell lysate | Click chemistry | x | List: 195 hits | |
SPalmE:1192 | Won SJ et al. | 2018 | Homo sapiens | HAP1 | Total cell lysate | Click chemistry | x | List: 984 hits | |
SPalmE:1193 | Won SJ et al. | 2018 | Homo sapiens | HAP1 | Total cell lysate | ARAC | x | List: 1394 hits | |
SPalmE:1194 | Won SJ et al. | 2018 | Homo sapiens | HAP1 | Total cell lysate | ARAC, | x | List: 1404 hits | |
SPalmE:1203 | Zhang X et al. | 2018 | Mus musculus | Brain | Total membrane | Enrichment by magnetic nanoparticles | x |
HC: 917 hits MC: 352 hits LC: 15 hits |
|
SPalmE:1259 | Dumoulin A et al. | 2018 | Mus musculus | F11 | Total membrane | ABE, NH2OH cleavage of thioester bond, LC-MS | x |
HC: 1 hits MC: 10 hits LC: 4 hits |
|
SPalmE:1260 | Wang Z et al. | 2018 | Bos taurus | Lens fiber cell | Total cell lysate | ABE, NH2OH cleavage of thioester bond, LC-MS | x | List: 52 hits | |
SPalmE:920 | Sobocińska J et al. | 2018 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | Click chemistry | x | LPS treatment: 646 hits | |
SPalmE:919 | Sobocińska J et al. | 2018 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | Click chemistry | x | List: 646 hits | |
SPalmE:908 | Sobocińska J et al. | 2018 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | Click chemistry | x |
Palm. up with LPS: 156 hits Palm. down with LPS: 189 hits |
|
SPalmE:1185 | Thinon E et al. | 2018 | Homo sapiens | HeLa | Total cell lysate | NH2OH cleavage of thioester bond, LC-MS, Alk16 Labeling | x |
Chymotrypsin: 286 hits Trypsin: 1291 hits |
|
SPalmE:1187 | Thinon E et al. | 2018 | Mus musculus | Macrophage Raw 264.7 | Total cell lysate | ARAC | x |
HC: 281 hits MC: 139 hits LC: 113 hits |
|
SPalmE:1303 | Zaręba-Kozioł M et al. | 2019 | Mus musculus | Brain | Postsynaptic density fraction | ABE, NH2OH cleavage of thioester bond, LC-MS | x | ||
SPalmE:1270 | Strassburger K et al. | 2019 | Drosophila melanogaster | Circa 160 L2 larvae | Total cell lysate | ABE, NH2OH cleavage of thioester bond, PAT KO, MS | x | List: 13 hits | |
SPalmE:1266 | Strassburger K et al. | 2019 | Drosophila melanogaster | Circa 160 L2 larvae | Total cell lysate | ABE, NH2OH cleavage of thioester bond, PAT KO, MS | x | List: 157 hits | |
SPalmE:1265 | Wang J et al. | 2019 | Mus musculus | 3T3-L1 | Total membrane | MS, BioID | x | List: 9 hits | |
SPalmE:1333 | Zaręba-Kozioł M et al. | 2019 | Mus musculus | Brain | Postsynaptic density fraction | ABE, NH2OH cleavage of thioester bond, LC-MS | x | ||
SPalmE:1433 | Zhou B et al. | 2019 | Homo sapiens | LNCaP | Total cell lysate | NH2OH cleavage of thioester bond, LC-MS, LB-ABE, ABE | Ortholog | in List [FGFR1, PTK7, EPHB1, EPHA2, FRK, LRC47, FGFR4] | List: 2929 hits |
SPalmE:1432 | Zhou B et al. | 2019 | Homo sapiens | LNCaP | Total cell lysate | ABE, SILAC, NH2OH cleavage of thioester bond, LC-MS | Ortholog | in List [FGFR1, PTK7, EPHB1, EPHA2, FRK, LRC47, FGFR4] | List: 590 hits |
SPalmE:1434 | Wegleiter T et al. | 2019 | Mus musculus | Neural stem cell | Total cell lysate | ABE, NH2OH cleavage of thioester bond, LC-MS | x | List: 370 hits | |
SPalmE:1438 | Mariscal J et al. | 2020 | Homo sapiens | PC3 | Total membrane | ARAC, NH2OH cleavage of thioester bond, LC-MS, LB-ABE | Ortholog | in HC [FGFR1, PTK7, EPHB1, EPHA2, FRK, LRC47, FGFR4] | HC: 1837 hits |
SPalmE:1439 | Mariscal J et al. | 2020 | Homo sapiens | PC3 | Large Extracellular Vesicles | ARAC, NH2OH cleavage of thioester bond, LC-MS, LB-ABE | Ortholog | in HC [FGFR1, PTK7, EPHB1, EPHA2, FRK, LRC47, FGFR4] | HC: 1350 hits |
SPalmE:1440 | Mariscal J et al. | 2020 | Homo sapiens | PC3 | Small Extracellular Vesicles | ARAC, NH2OH cleavage of thioester bond, LC-MS, LB-ABE | Ortholog | in HC [FGFR1, PTK7, EPHB1, EPHA2, FRK, LRC47, FGFR4] | HC: 600 hits |
SPalmE:1435 | Morrison E et al. | 2020 | Homo sapiens | Jurkat | Total cell lysate | ABE, NH2OH cleavage of thioester bond, LC-MS, SILAC | Ortholog | in Unstimulated [FGFR1, PTK7, EPHB1, EPHA2, FRK, LRC47, FGFR4] | Unstimulated: 37 hits |
SPalmE:1436 | Morrison E et al. | 2020 | Homo sapiens | Jurkat | Total cell lysate | ABE, NH2OH cleavage of thioester bond, LC-MS, SILAC | Ortholog | in List [FGFR1, PTK7, EPHB1, EPHA2, FRK, LRC47, FGFR4] | List: 185 hits |
SPalmE:1458 | Morrison E et al. | 2020 | Homo sapiens | Jurkat | Total cell lysate | ABE, NH2OH cleavage of thioester bond, LC-MS, SILAC | x | Stimulated: 148 hits | |
SPalmE:1437 | Mariscal J et al. | 2020 | Homo sapiens | PC3 | Total cell lysate | ARAC, NH2OH cleavage of thioester bond, LC-MS, LB-ABE | Ortholog | in HC [FGFR1, PTK7, EPHB1, EPHA2, FRK, LRC47, FGFR4] | HC: 1869 hits |
SPalmE:1450 | Zaręba-Kozioł M et al. | 2021 | Mus musculus | Brain | Synaptoneurosomal fraction | ABE, NH2OH cleavage of thioester bond, LC-MS | x | List: 1093 hits | |
SPalmE:1444 | Miles MR et al. | 2021 | Homo sapiens | Heart | Total cell lysate | ARAC, NH2OH cleavage of thioester bond, LC-MS | x | List: 687 hits | |
SPalmE:1447 | Pradhan AJ et al. | 2021 | Homo sapiens | HT-29 | Total cell lysate | Labeling of substrate with C20 AlkFA (Alk-18), LC-MS | Ortholog | in List [FGFR1, PTK7, EPHB1, EPHA2, FRK, LRC47, FGFR4] | List: 1173 hits |
SPalmE:1448 | Pradhan AJ et al. | 2021 | Homo sapiens | HT-29 | Total cell lysate | Labeling of substrate with C20 AlkFA (Alk-18), LC-MS | Ortholog | in List [FGFR1, PTK7, EPHB1, EPHA2, FRK, LRC47, FGFR4] | List: 770 hits |
SPalmE:1449 | Ripamonti M et al. | 2021 | Mus musculus | NIH-3T3 | Total cell lysate | ARAC, NH2OH cleavage of thioester bond, LC-MS | x | List: 199 hits | |
SPalmE:1445 | Miles MR et al. | 2021 | Rattus norvegicus | Heart | Total cell lysate | ARAC, NH2OH cleavage of thioester bond, LC-MS | x | List: 399 hits | |
SPalmE:1451 | Zaręba-Kozioł M et al. | 2021 | Mus musculus | Brain | Synaptoneurosomal fraction | ABE, NH2OH cleavage of thioester bond, LC-MS | x | List: 1048 hits | |
SPalmE:1452 | Zaręba-Kozioł M et al. | 2021 | Mus musculus | Brain | Synaptoneurosomal fraction | ABE, NH2OH cleavage of thioester bond, LC-MS | x | List: 1112 hits | |
SPalmE:1453 | Zaręba-Kozioł M et al. | 2021 | Mus musculus | Brain | Synaptoneurosomal fraction | ABE, NH2OH cleavage of thioester bond, LC-MS | Ortholog | in List [PTK7, MET, LRC47, FLT3, UFO, TYRO3] | List: 1040 hits |
SPalmE:1455 | Ziemlińska E et al. | 2021 | Mus musculus | Liver | Total membrane | ABE, NH2OH cleavage of thioester bond, LC-MS | x |
HC: 850 hits MC: 303 hits LC: 21 hits |
|
SPalmE:1446 | Miles MR et al. | 2021 | Canis familiaris | Heart | Total cell lysate | ARAC, NH2OH cleavage of thioester bond, LC-MS | x | List: 464 hits | |
SPalmE:1454 | Ziemlińska E et al. | 2021 | Mus musculus | Liver | Total membrane | ABE, NH2OH cleavage of thioester bond, LC-MS | Ortholog | in HC [PTK7, MET, LRC47, FLT3, UFO, TYRO3] |
HC: 675 hits MC: 360 hits LC: 27 hits |
SPalmE:1443 | Uzbekova S et al. | 2021 | Bos taurus | Bovine follicular cells | Total cell lysate | ABE, NH2OH cleavage of thioester bond, LC-MS | x | List: 80 hits | |
SPalmE:1456 | Gao J et al. | 2022 | Mus musculus | Testis | Total cell lysate | ABE, NH2OH cleavage of thioester bond, LC-MS | Ortholog | in HC [PTK7, MET, LRC47, FLT3, UFO, TYRO3] | HC: 4107 hits |
SPalmE:1442 | Gorenberg EL et al. | 2022 | Mus musculus | Brain | Total cell lysate | ARAC, NH2OH cleavage of thioester bond, LC-MS | Ortholog | in List [PTK7, MET, LRC47, FLT3, UFO, TYRO3] | List: 1597 hits |
SPalmE:1441 | Gorenberg EL et al. | 2022 | Mus musculus | Brain | Synaptic fraction | ARAC, NH2OH cleavage of thioester bond, LC-MS | Ortholog | in List [PTK7, MET, LRC47, FLT3, UFO, TYRO3] | List: 1378 hits |
SPalmE:1457 | Gao J et al. | 2022 | Mus musculus | Testis | Total cell lysate | ABE, NH2OH cleavage of thioester bond, LC-MS | Ortholog | in HC [PTK7, MET, LRC47, FLT3, UFO, TYRO3] | HC: 3870 hits |
Summary table by organism
Organism | Total number of palmitoyl-proteome articles | Total number of palmitoyl-proteomes | Number of palmitoyl-proteomes containing this protein or an ortholog | % of palmitoyl-proteomes containing this protein or an ortholog | Orthologs |
---|---|---|---|---|---|
S. cerevisiae S288c | 1 | 1 | 0 | 0.0 | NA |
R. norvegicus | 3 | 4 | 1 | 25.0 | EPHA3_RAT , EPHB1_RAT , EPHA5_RAT |
H. sapiens | 22 | 38 | 19 | 50.0 | FGFR1_HUMAN , PTK7_HUMAN , EPHB1_HUMAN , EPHA2_HUMAN , FRK_HUMAN , LRC47_HUMAN , FGFR4_HUMAN |
M. musculus | 23 | 37 | 8 | 21.6 | PTK7_MOUSE , MET_MOUSE , LRC47_MOUSE , FLT3_MOUSE , UFO_MOUSE , TYRO3_MOUSE |
T. brucei brucei | 1 | 1 | 0 | 0.0 | NA |
P. falciparum | 1 | 2 | 0 | 0.0 | NA |
A. thaliana | 1 | 1 | 1 | 100.0 | NA |
S. pombe | 1 | 1 | 0 | 0.0 | NA |
C. neoformans var. grubii serotype A strain H99 | 1 | 2 | 0 | 0.0 | NA |
T. gondii | 2 | 2 | 0 | 0.0 | NA |
A. fumigatus | 1 | 1 | 0 | 0.0 | NA |
B. taurus | 2 | 2 | 0 | 0.0 | NA |
D. melanogaster | 1 | 2 | 0 | 0.0 | NA |
C. familiaris | 1 | 1 | 0 | 0.0 | NA |